Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g02592 ATGAATAACGACAACTACAACAATCGGGAAAAAGATCAGCGGATCAAAGATAGTACCATAGCAAGCCTAGACTCCAGATTCAATCAGACTCTCAGGAATGTTCAAGGGTTTCTTAAAGGTCGTAGTATTCCtggtaaaatattattgactCGGAGGTCGGACCCGCTAGATAACTCAAACTCAAAGGGAAATTTACCAAATCACGAAAGGAGCTTCTCTTACAATGAAACTGGCACAAGTGATCACACAACCGAGGCAGTAGAGGAAGAAGTCTTGAATACAAGCAAGCCAATTGGTATTACCAATGTGAACAAGTTAAAAATGTCAACCCTTCACATAGAGAACACATCCAAAGAAGTTCAGAAATCTTCCATGGGTGCTAGAGCCACGGATTCTGCCAGAGTTATGAAGTTCACTCAGGCCCTTTCTGGGTCGACTGTTGATCAATTGAACTTTTCATTAGTTGAAATTGGCCTCCATCTCAGTTTGGCAATCCCgcttgaaatttattttgtagaaaagTTGCGTGAGTTGGCTTGGAGTGGTGTGCCAGATTCCATGCGCCCTACAGTGTGGAGGCTTCTCTTGGGATATGCACCACCTAATTCAGATAGAAGGGAGGGAGTTCTGAGAAGGAAGCGTCTTGAGTATCTTGACTGTGTTTCTCTATATTATGATATTCCTGATACAGAACGTTCAGATGATGAGATCAACATGCTTCGCCAGATTGCTGTTGATTGTCCAAGAACTGTACCTGATGTTACATTCTTCCAGCAACAGCAAGTTCAGAAATCCTTGGAGCGTATTCTTTATACATGGGCAATTCGGCATCCTGCGAGTGGATATGTTCAGGGGATAAATGATCTTGTTACTCCATTTTTTGTTGTCTTCCTATCAGAATACTTAGAAGGGGGTATAGATAACTGGTCAATGTCTGATTTATCTTCTGATAAAATCTCCAATATAGAGGCTGATTGCTATTGGTGCTTGTCAAAGTTACTTGATGGTATGCAAGACCATTACACATTTGCTCAACCAGGAATTCAGAGGCTTGTTTTTAAGTTGAAGGAATTGGTCAGGAGGATTGATGAACCTGTTTCAAGACACATGGAGGATCAAGGACTGGAATTTCTTCAGTTTGCTTTCCGCTGGTTCAATTGTCTTCTAATCCGTGAGaTACCCTTTCATCTCGTTACTCGCCTTTGGGACACATATCTAGCTGAAGGAGATGCTTTACCAGACTTCTTGGTGTATATATTTGCCAGTTTTCTTCTAACGTGGTCAGAGAAGCTTCAGAAGCTTGATTTCCAAGAGTTGCTAGCTGAGAAGGCAATTGTGCTTTCTgGAAACGTTTTCCCGTA 1361 0.4078 MNNDNYNNREKDQRIKDSTIASLDSRFNQTLRNVQGFLKGRSIPGKILLTRRSDPLDNSNSKGNLPNHERSFSYNETGTSDHTTEAVEEEVLNTSKPIGITNVNKLKMSTLHIENTSKEVQKSSMGARATDSARVMKFTQALSGSTVDQLNFSLVEIGLHLSLAIPLEIYFVEKLRELAWSGVPDSMRPTVWRLLLGYAPPNSDRREGVLRRKRLEYLDCVSLYYDIPDTERSDDEINMLRQIAVDCPRTVPDVTFFQQQQVQKSLERILYTWAIRHPASGYVQGINDLVTPFFVVFLSEYLEGGIDNWSMSDLSSDKISNIEADCYWCLSKLLDGMQDHYTFAQPGIQRLVFKLKELVRRIDEPVSRHMEDQGLEFLQFAFRWFNCLLIREIPFHLVTRLWDTYLAEGDALPDFLVYIFASFLLTWSEKLQKLDFQELLAEKAIVLSGNVFP 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g02592 453 SMART tbc_4 179 435 IPR000195 -
Bva07g02592 453 MobiDBLite consensus disorder prediction 49 81 - -
Bva07g02592 453 PANTHER RAB-GTPASE-TBC DOMAIN-CONTAINING PROTEIN-RELATED 2 152 - -
Bva07g02592 453 Gene3D putative rabgap domain of human tbc1 domain family member 14 like domains 222 343 - -
Bva07g02592 453 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 345 440 IPR035969 -
Bva07g02592 453 Gene3D - 344 442 - -
Bva07g02592 453 PANTHER TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN 174 441 - -
Bva07g02592 453 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 168 369 IPR035969 -
Bva07g02592 453 PANTHER TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN 2 152 - -
Bva07g02592 453 PANTHER RAB-GTPASE-TBC DOMAIN-CONTAINING PROTEIN-RELATED 174 441 - -
Bva07g02592 453 Gene3D - 168 210 - -
Bva07g02592 453 Pfam Rab-GTPase-TBC domain 185 430 IPR000195 -
Bva07g02592 453 ProSiteProfiles TBC/rab GAP domain profile. 182 409 IPR000195 -
Bva07g02592 453 MobiDBLite consensus disorder prediction 53 81 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g02592 Bva-Chr7 20460532 20466490 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g02592 K20360 - qsu:112012707 708.368
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g02149 09 17769435 17775620 Bva07g02592 07 20460532 20466490 BWGD
Bva07g02592 07 20460532 20466490 Bva07g02592 07 20460532 20466490 ECH