Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g00756 ATGCAGCTTCATATTTCACCAAGTTTAAGGCATGTCACTGTGCTTCCGGGCAAAGGGTTTAAAGAATTTATCAAAGTGAAGGTTGCAACAAGATGGCCTTCGTACCGGATGCTCTTCTATTCACTCTTGTTCTTCACATTTCTTGTTCGCTTTGCGTTTGTGTTGGCAGCAGTGGATGGCATTGATGGAGAAAACAAGTGCTCTACTATAGGTTGTATCGGGAAAAAAATAGGTCCAAGGATTTTGGGAAGAAGGCTTGAATCAAATGTGCCAGAAGTGATATACCGAATATTAGATGAACCCGTCGGCAAAGATGAACTAGAGGGAAGATCTGATATCCCACAGACTTTACAAGATTTCATGACTGAAATCAAGGAAGGTGGATATGATGCAAAGACATTTGCTGTTAAACTTCGAGAAATGGTCGCCCTTATGGAAGAAAGAACCAGAACAGCTAAAATCCAAGAATACTTATATCGTCACATAGCATCAAGCAGCATACCAAAACAGCTTCACTGTCTTGTCTTGGGATTGGCCAACGAGCACTCTAACAATGCAGCAGCACGCCTTCAGCTCCCTTCTGCAGAACTAGTCCCTGCCCTGGTTGACAACTCCTACTTCCACTTTGTCCTTGCCTCAGACAATGTGTTGGCTGCCTCCGTGGTTGCAACATCGCTTGTTCGCAACTCCTTGCAGCCCCAGAAAGTTGTGCTGCACATAATCACAGACAGAAAGACTTATCATCCTATGCAGGCTTGGTTCTCATTGCACCCTCTAACACCTGCTATAATTGAGGTCAAGGCATTGCACCATTTTGATTGGCTTTCAAAGGGGAAAGTGCCAGTTCTGGAAGCTATGGAAAAAGATCAACAAGTGCGGTCACAATTCAGAGGAGGGTCATCTGCTATCATAACAACTAATACAGATAAGCCAGTAGTTATTGCATCAAAGCTACAAGCACTTAGTCCCAAGTATACTTCAGTGATGAACCACATTCGTATACATCTTCCAGAGTTATTTCCAAGCCTTAATAAGGTGGTCTTCCTGGATGATGACATTGTGGTACAAACTGATCTTTCCGCTCTGTGGGACATTGAAATGAATGGGAAAGTCAATGGAGCAGTAGAAACATGTACTGGAGAAGATAAGTTTGTGATGTCAAAGAGGTTTAAAAGCTATTTGAACTTCTCCCACCCTCTAATATCCGAGAACTTGGATCCCAGTGAATGTGCTTGGGCTTATGGCATGAACATTTTTGATCTAGAGGCCTGGAGGAAGACCAATATAAGCCTTACATATCATCATTGGGTTGAGCAGAACTTAAAATCAGACCTCAGTTTGTGGCAGCTAGGGACATTACCTCCGGGATTAATAGCATTTCATGGCCACGTTCAGACAATTGATCCTTTCTGGCACATGCTGGGTCTGGGATACCAGGAAAATACAAGTTTTGCTGATGCTGAGAGTGCTGGTGTCATCCATTTTAATGGCAGGGCAAAGCCTTGGCTGGAAATAGCTTTCCCTCGACTTCGGCCATTGTGGGCTAAGTATGTGGACTTCTCGGATAAGTTCGTCAAGAGCTGTCACATAAGGGCATCATA 1601 0.4366 MQLHISPSLRHVTVLPGKGFKEFIKVKVATRWPSYRMLFYSLLFFTFLVRFAFVLAAVDGIDGENKCSTIGCIGKKIGPRILGRRLESNVPEVIYRILDEPVGKDELEGRSDIPQTLQDFMTEIKEGGYDAKTFAVKLREMVALMEERTRTAKIQEYLYRHIASSSIPKQLHCLVLGLANEHSNNAAARLQLPSAELVPALVDNSYFHFVLASDNVLAASVVATSLVRNSLQPQKVVLHIITDRKTYHPMQAWFSLHPLTPAIIEVKALHHFDWLSKGKVPVLEAMEKDQQVRSQFRGGSSAIITTNTDKPVVIASKLQALSPKYTSVMNHIRIHLPELFPSLNKVVFLDDDIVVQTDLSALWDIEMNGKVNGAVETCTGEDKFVMSKRFKSYLNFSHPLISENLDPSECAWAYGMNIFDLEAWRKTNISLTYHHWVEQNLKSDLSLWQLGTLPPGLIAFHGHVQTIDPFWHMLGLGYQENTSFADAESAGVIHFNGRAKPWLEIAFPRLRPLWAKYVDFSDKFVKSCHIRAS 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g00756 533 Pfam Glycosyl transferase family 8 206 506 IPR002495 GO:0016757
Bva09g00756 533 PANTHER GALACTURONOSYLTRANSFERASE 12-RELATED 12 531 - -
Bva09g00756 533 PANTHER GALACTURONOSYLTRANSFERASE 4-RELATED 12 531 IPR029993 GO:0047262
Bva09g00756 533 SUPERFAMILY Nucleotide-diphospho-sugar transferases 208 530 IPR029044 -
Bva09g00756 533 CDD GT8_like_1 207 519 - -
Bva09g00756 533 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 209 525 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g00756 Bva-Chr9 3861148 3864497 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g00756 1 533 Glycosyltransferase AT5G54690 79.065 0.0 879
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g00756 K20867 - qsu:112027387 954.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00756 09 3861148 3864497 Bva07g01870 07 16828730 16832122 BWGD
Bva09g00756 09 3861148 3864497 Bva09g00756 09 3861148 3864497 ECH