Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g01870 ATGCAGCTTCATATTTCGCCAAGTTTAAGGCACGTGACCGTGTTTCCGGGCAAAGGGCTTAAAGAATTTATCAAAGTGAAGGTTGCATCAAGAAGGCTTTCGTATCGGATGCTCTTCTATTCACTCTTGTTCTTCACGTTTCTTCTTCggtttgtgtttgttttgaCAGCAGTGGATGGCATTGACGGAGAAAACAAGTGCTCTACTATAGGTTGTATCGGGAAAAAACTAGGACCGAGGATTTTGGGAAGAAGGCTTGAATCAAATATGCCAGATGTGATATTCCGAATATTAGATGAACCCATCGGTAAAGATGAACTAGAGGGAAGATCTGATGTACCGCAGACTTTGGAAGATTTCATGACTGAAATAAAGGAAGGTGGATATGATGCAAAGACGTTTGCTGTTAAACTTCGAGAAAtgGTTACCCTTATGGAAGAAAGGACCAGGAAAGCTAAAATCCAAGAATATCTTTACCGTCATATAGCATCAAGCAGCATACCCAAACAACTTCACTGCCTTGCCTTGAGATTGGCTGATGAGCACTCGAACAATGCAGCAGCACGCCTTCAACTCCCTTCTGCAGAATTAGTCCCTGCCCTGGTTGATAACAACTACTTCCACTTTGTCCTTGCCTCAGACAATGTGTTGGCTGCCTCTGTGGTTGCAACATCACTTGTCCGAAACTCTTTGCGGCCACACAAAGTTGTTCTGCACATAATTACAGACAGAAAGACTTACTATCCCATGCAGGCTTGGTTCTCATTGCACCCTCTAACGCCTGCTATAATTGAGGTCAAAGCATTGCACCAGTTTGATTGGCTGTCAAAGGGAAAGGTGCCAGTTCTGGAAGCAATGGAAAAAGATCAACAAGTGCGGTCACAATTTAGAGGGGGATCGTCTGCTATCGTAACAAATAATACGGATAAGCCAGTAGTTATTGCAGCAAAGCTACAAGCACTCAATCCCAAATATAATTCAGTGATGAACCACATTCGTATACATCTTCCAGAGTTGTTCCCAAGCCTTAATAAGGTGGTCTTCCTGGATGATGACGTTGTGGTACAAACTGATCTTACCCCTCTATGGGACATTGACATGAATGGGAAAGTCAATGGAGCGGTAGAAACATGTACTGGAGAAGATAAGTTTGTCATGTCGAAGAGGTTTAAAAGCTATTTGAACTTCTCCCACCCTCTAATATCCGAGAATTTCGATCCCAATGAATGTGCTTGGGCTTATGGCATGAACATTTTTGATCTAGAGGCTTGGAGGAAGACCAATATAAGCCTTACATACCATCATTGGGTTGAACAGAACTTAAAATCAGACCTCAGTTTGTGGCAGCTAGGGACATTACCTCCGGGATTAATAGCATTTCATGGCCACGTCCACACCATTGATCCGTTCTGGCATATGCTGGGCCTGGGATACCAGGAAAATACAAGTTTTGCTGATGCTGAGAGCGCTGGTGTCATCCATTTTAATGGCAGGGCAAAGCCTTGGCTGGAAATAGCTTTCCCTCAACTTCGGCCATTGTGGGCTAAGTATGTGGACTTTTCGGATAAGTTCATCAAGAGCTGTCACATTAGGGTATCATA 1601 0.4304 MQLHISPSLRHVTVFPGKGLKEFIKVKVASRRLSYRMLFYSLLFFTFLLRFVFVLTAVDGIDGENKCSTIGCIGKKLGPRILGRRLESNMPDVIFRILDEPIGKDELEGRSDVPQTLEDFMTEIKEGGYDAKTFAVKLREMVTLMEERTRKAKIQEYLYRHIASSSIPKQLHCLALRLADEHSNNAAARLQLPSAELVPALVDNNYFHFVLASDNVLAASVVATSLVRNSLRPHKVVLHIITDRKTYYPMQAWFSLHPLTPAIIEVKALHQFDWLSKGKVPVLEAMEKDQQVRSQFRGGSSAIVTNNTDKPVVIAAKLQALNPKYNSVMNHIRIHLPELFPSLNKVVFLDDDVVVQTDLTPLWDIDMNGKVNGAVETCTGEDKFVMSKRFKSYLNFSHPLISENFDPNECAWAYGMNIFDLEAWRKTNISLTYHHWVEQNLKSDLSLWQLGTLPPGLIAFHGHVHTIDPFWHMLGLGYQENTSFADAESAGVIHFNGRAKPWLEIAFPQLRPLWAKYVDFSDKFIKSCHIRVS 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g01870 533 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 209 525 IPR029044 -
Bva07g01870 533 PANTHER GALACTURONOSYLTRANSFERASE 12-RELATED 12 531 - -
Bva07g01870 533 PANTHER GALACTURONOSYLTRANSFERASE 4-RELATED 12 531 IPR029993 GO:0047262
Bva07g01870 533 Pfam Glycosyl transferase family 8 203 506 IPR002495 GO:0016757
Bva07g01870 533 SUPERFAMILY Nucleotide-diphospho-sugar transferases 208 530 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g01870 Bva-Chr7 16828730 16832122 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g01870 1 533 Glycosyltransferase AT5G54690 80.187 0.0 895
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g01870 K20867 - gmx:100802623 941.028
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00756 09 3861148 3864497 Bva07g01870 07 16828730 16832122 BWGD
Bva07g01870 07 16828730 16832122 Bva07g01870 07 16828730 16832122 ECH