Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g00745 ATGGCTTCCACCATTACTTCCTTTCTCTCAGCCAAAACCACAAAGGCTTCTCTCTTTGAATCCTCATTCAAAGGCACCCAATTAACTCCGAGCAATGTTAGTATTCCATCTGTTAGATCCAATGCAAAACAGAACCTTTCTGCCTCCATGTCTGCACCCTCACCTCCTCCCTATGATCTCCGAAATTTCAAGTTCGACCCCATTAGAGAATCCATCGTATCTCGCGAGATGACCCGCAGGTATATGACAGACATGAACACCTTTGCAGACACTGACGTTGTCATTGTTGGTGCCGGGTCTGCCGGGCTTTCCTGTGCCTATGAACTCAGCAAAGACCCATCCGTGCAGATAGCCATCATTGAACAGTCTGTCAGCCCTGGCGGCGGGGCGTGGCTCGGCGGCCAGCTCTTCTCTGCCATGGTGGTACGTAAACCAGCGCATCTCTTCCTTGACGAGCTTGGAGTTGCGTATGATGAGCTTGACAACTATGTAGTGGTCAAGCACGCTGCTCTGTTTACTTCGACAATCATGAGCAAGCTCTTGGCTAGGCAAAATGTGAAGCTGTTCAACGCAGTTGCAGTTGAGGATTTAATCGTAAAGAACGGAAGAGTTGGTGGGGTTGTGACTAATTGGGCTTTGGTTTCAATGAACCATGATACTCAGTCTTGTATGGACCCTAATGTTATGGAAGCTAAGGTGGTGGTGAGCTCTTGTGGACACGACGGACCATTTGGAGCCACTGGGGTGAAGAGACTCAAGAGTATTGGGTTGATTGACAGGGTGTCCGGAATGAAGGCACTTGATATGAATAGCGCTGAGGATGCTATTGTGAGACTCACCAGGGAGGTTGTCCCTGGGATGATCGTTACTGGAATGGAAGTTGCAGAGATCGATGGTGCCTCAAGAATGGGTCCAACGTTCGGAGCCATGATGATATCAGGGCAGAAGGCAGCGCACCTGGCCCTGAAGTCACTGGGACTTCCAAATGCAGTGGAAACTGTTCAAAAAATGCAACCAGAGATGATCCTCGCTGCTGCAGAATCTGTTGAGACTGCAGATGCTTG 1064 0.4944 MASTITSFLSAKTTKASLFESSFKGTQLTPSNVSIPSVRSNAKQNLSASMSAPSPPPYDLRNFKFDPIRESIVSREMTRRYMTDMNTFADTDVVIVGAGSAGLSCAYELSKDPSVQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHLFLDELGVAYDELDNYVVVKHAALFTSTIMSKLLARQNVKLFNAVAVEDLIVKNGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLKSIGLIDRVSGMKALDMNSAEDAIVRLTREVVPGMIVTGMEVAEIDGASRMGPTFGAMMISGQKAAHLALKSLGLPNAVETVQKMQPEMILAAAESVETADA 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g00745 354 PANTHER THIAMINE THIAZOLE SYNTHASE, CHLOROPLASTIC 1 354 - -
Bva09g00745 354 PANTHER THIAMINE THIAZOLE SYNTHASE 1 354 - -
Bva09g00745 354 Hamap Thiamine thiazole synthase, chloroplastic [THI4]. 6 334 IPR027495 GO:0009228
Bva09g00745 354 TIGRFAM TIGR00292: thiazole biosynthesis enzyme 70 325 IPR002922 -
Bva09g00745 354 Gene3D - 90 325 IPR036188 -
Bva09g00745 354 Pfam Thi4 family 74 307 - -
Bva09g00745 354 Gene3D - 59 89 - -
Bva09g00745 354 SUPERFAMILY FAD/NAD(P)-binding domain 49 318 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g00745 Bva-Chr9 3806611 3808248 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g00745 K03146 - tcc:18593644 546.584
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00745 09 3806611 3808248 Bva07g01882 07 16902083 16903469 ECH
Bva09g00745 09 3806611 3808248 Bva09g00745 09 3806611 3808248 ECH