Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g01882 ATGGCGTCCACCACCATGACTTCCTTTCTTTCAGCCAAAGGGCCAAAGCCTTCTCTCTTTGAATCCTCATTTCAAGGCATCCCCACTTTAACTCCGAACGCTGTTCGTCTTCAATCTGTTAGATCAAATGCCAAACAGAACCTCCCTGCCTCTCTATCAGCCATCTCACCTCCCTATGATCTCCAAAACTTTAAGTTCAATCCTATTGAGGAATCCATGGTGTCTATTGAGATGAGCCGCAGGTACTTGACGGACGTGATCACCCATGCTGACACTGACGTTGTCATCGTTGGTGCCGGTTCTGCTGGGCTTACTTGTGCCTACGAACTCAGCAAAAACCCATCTGTGAAAGTCGCCTTAGTTGAACAATCTGTCAGCCCTGGAGGCGGCGCATGGCTCGGCGGCCAGCTCTTCTCTGCCATgGTTGTACGTAAACCAGCGCATCTCTTTCTGGACGAGCTTGGAGTTAAGTATGATGAGCAGGATAACTATGTAGTGATCAAGCATGCAGCTTTATTCACTTCGACCATCATGAGTAAACTCTTGGCTAGGAAAAATGTGAAGCTCTTCAATGCAGTTGCAGTCGAGGATCTAATCGTGAAGAACGGAAAAGTTGGTGGGGTTGTGACAAACTGGGCTTTGGTTTCCATGAATCATGATACTCAGTCTTGCATGGACCCCAATGTGATGGAGGCTAAGGTGGTGGTGAGCTCTTGTGGACACGATGGGCCATTTGGAGCTACCGGGGTGAAGAGGCTCAAGAGTATTGGGTTGATTGACGGGTTGCCCGGAATGAAGGCGTTGGATATGAACGTTGCTGAAGATGTTATTGTTAGACTCACCAGGGAGGTTGTTCCTGGAATGATCGTTACAGGAATGGAAGTTGCCGAGATTGATGGTGCCCCAAGGATGGGTCCGACGTTTGGAGCGATGATGATATCAGGGCAGAAGGCAGCGCACCTGGCCCTAAGGTCACTGGGACTTCCAAATGCAGTGGAAAATGTCGAAAACATTCACCCAGAGATGGTCCTAGCTGCTGCAGAATCCGCTCAATTTACAGACGCTTG 1067 0.4911 MASTTMTSFLSAKGPKPSLFESSFQGIPTLTPNAVRLQSVRSNAKQNLPASLSAISPPYDLQNFKFNPIEESMVSIEMSRRYLTDVITHADTDVVIVGAGSAGLTCAYELSKNPSVKVALVEQSVSPGGGAWLGGQLFSAMVVRKPAHLFLDELGVKYDEQDNYVVIKHAALFTSTIMSKLLARKNVKLFNAVAVEDLIVKNGKVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLKSIGLIDGLPGMKALDMNVAEDVIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALRSLGLPNAVENVENIHPEMVLAAAESAQFTDA 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g01882 355 Pfam Thi4 family 77 308 - -
Bva07g01882 355 PANTHER THIAMINE THIAZOLE SYNTHASE, CHLOROPLASTIC 5 355 - -
Bva07g01882 355 Gene3D - 60 90 - -
Bva07g01882 355 Hamap Thiamine thiazole synthase, chloroplastic [THI4]. 7 335 IPR027495 GO:0009228
Bva07g01882 355 PANTHER THIAMINE THIAZOLE SYNTHASE 5 355 - -
Bva07g01882 355 TIGRFAM TIGR00292: thiazole biosynthesis enzyme 71 325 IPR002922 -
Bva07g01882 355 Gene3D - 91 326 IPR036188 -
Bva07g01882 355 SUPERFAMILY FAD/NAD(P)-binding domain 48 319 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g01882 Bva-Chr7 16902083 16903469 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g01882 K03146 - gmx:547461 540.421
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00745 09 3806611 3808248 Bva07g01882 07 16902083 16903469 ECH
Bva07g01882 07 16902083 16903469 Bva07g01882 07 16902083 16903469 ECH