Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g00535 ATGTCTAGAATGTCTGGGTTCCTGGGATTGTTTGTGGGTCTTGTGTTGGTGGGGGTGGCTTCCTCTGCCAACTTTGATGAACTTTTCCAGCCAAGCTGGGCTTTGGACCATTTCGTCCAAGAAGGAGACCTTCTTAAGCTCAAACTTGATAATTATTCCGGTGCTGGTTTTGTATCCAAAAACAAGTATATGTTTGGGAAAGTGACCATTCAACTTAAGCTTGTGGAGGGTGACTCTGCTGGAACTGTTACTGCCTTCTATATGTCATCTGAGGGCCTAAATCACAACgaatttgattttgagtttttGGGCAACACCAGTGGTGAACCTTACTCTGTCCAGACCAATGTGTATGTGAATGGCGTGGGTAATAGGGAGCAGAGGCTAAACCTCTGGTTCGATCCCACCAAGGATTTCCACACCTACTCGATCTTCTGGAATCAGCGTCAAGTTGTATTTCAAGTTGATGAGACCCCAATTAGGGTGCACACAAACATGGAACACAAAGGCATTCCTTTCCCGAAGGACCAAGCCATGGGCGTATACAGCTCTATATGGAACGCAGACGATTGGGCCACTCAGGGTGGTCGGGTTAAGACCGATTGGAGCAACGCACCATTCATTGTCACCTACAAGGCCTTTGAAATCAATGCCTGCGAAGCCCCTGCCTCCGTGGCAGCTATGGATAATGCTAAAAAATGCAGTAGCAGTGAGGATAAGAAGTATTGGTGGGACGAGCCTGCATTGTCTGCGTTGAGTCTGCATCAGAGCCACCAGCTCATGTGGGTTAGGGCCAATCATATGGTCTATGACTATTGTAGTGACACTGCTAGGTTCCCTGTGATCCCTGCGGAGTGTGTCCATCACCGTCATCAGTG 878 0.4738 MSRMSGFLGLFVGLVLVGVASSANFDELFQPSWALDHFVQEGDLLKLKLDNYSGAGFVSKNKYMFGKVTIQLKLVEGDSAGTVTAFYMSSEGLNHNEFDFEFLGNTSGEPYSVQTNVYVNGVGNREQRLNLWFDPTKDFHTYSIFWNQRQVVFQVDETPIRVHTNMEHKGIPFPKDQAMGVYSSIWNADDWATQGGRVKTDWSNAPFIVTYKAFEINACEAPASVAAMDNAKKCSSSEDKKYWWDEPALSALSLHQSHQLMWVRANHMVYDYCSDTARFPVIPAECVHHRHQ 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g00535 292 Pfam Glycosyl hydrolases family 16 29 203 IPR000757 GO:0004553|GO:0005975
Bva09g00535 292 Gene3D - 14 292 - -
Bva09g00535 292 SUPERFAMILY Concanavalin A-like lectins/glucanases 25 290 IPR013320 -
Bva09g00535 292 Pfam Xyloglucan endo-transglycosylase (XET) C-terminus 239 286 IPR010713 GO:0005618|GO:0006073|GO:0016762|GO:0048046
Bva09g00535 292 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 8-RELATED 13 290 IPR044791 GO:0004553
Bva09g00535 292 CDD GH16_XET 20 286 IPR016455 GO:0010411|GO:0016762|GO:0042546
Bva09g00535 292 PIRSF EndGlu_transf 2 291 IPR016455 GO:0010411|GO:0016762|GO:0042546
Bva09g00535 292 PRINTS Glycosyl hydrolase family 16 signature 113 126 IPR008264 GO:0004553|GO:0005975
Bva09g00535 292 PRINTS Glycosyl hydrolase family 16 signature 131 148 IPR008264 GO:0004553|GO:0005975
Bva09g00535 292 PRINTS Glycosyl hydrolase family 16 signature 55 73 IPR008264 GO:0004553|GO:0005975
Bva09g00535 292 ProSiteProfiles Glycosyl hydrolases family 16 (GH16) domain profile. 5 211 IPR000757 GO:0004553|GO:0005975
Bva09g00535 292 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 13 290 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g00535 Bva-Chr9 2861995 2864621 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g00535 55 291 Glycoside Hydrolase AT4G03210 74.684 8.52e-139 390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g00535 K08235 - gmx:100801567 522.702
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva07g02103 07 17903816 17906181 Bva09g00535 09 2861995 2864621 BWGD
Bva09g00535 09 2861995 2864621 Bva09g00535 09 2861995 2864621 ECH