Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g02103 ATGTCTGGCTTCTTGGGATTGTTTTTGGGTCTAATGTTGGTGGGGGTGGCTTCCTCTGCCAACTTTGATGAACTTTTCCAGCCAAGCTGGGCTTTGGACCATTTCGTCCGTGAAGGAGAACTCCTTAAGCTCAGGCTTGACAATTATTCTGGTGCTGGTTTTGTATCCAAAAACAAGTATATGTTTGGGAAAGTGACCATTCAACTTAAGCTAGTGGAGGGTGACTCTGCTGGAACTGTCGCTGCCTTCTATATGTCATCGGAGGGCCCCAATCACAACGAGTTTGATTTTGAGTTCTTGGGCAACACCTCTGGTGAACCTTACTCTGTACAGACCAATTTGTATGTGAATGGCGTGGGTAACAGAGAGCAAAGGTTAAACCTCTGGTTCGACCCCACCAAGGAGTTCCACAACTACTCCATCTTCTGGAATCAGTGTCAAGTTGTGTTCCTAGTGGATGAGACCCCAATTAGGGTGCACACAAATATGGAACACAAAGGCATTCCTTTCCCCAAAGACCAAGCGATGGGCGTATACAGCTCCATATGGAATGCAGACGATTGGGCCACTCAGGGTGGTCGGGTCAAGACGGATTGGAGCCACGCACCATTCATCATCACCTACAAGGCCTTTGAAATCAATGCCTGCGAATGCCCCGTCTCAGGGGCAGCAGTAGAAAATACTAGAAAGTGCAGTAGCAGCgaggataaaaaatattggtgGGACCAGCCTACACTGTCTGAGCTGAGTTTTCACCAGAGCCACCAGCTTATGTGGGTTAGGGCCAACCACATGGTCTATGACTATTGCAGCGACACTGCAAGGTTCCCTCAGACACCTGCCGAGTGTGTCCATCACATTCACCGTCATTA 872 0.4782 MSGFLGLFLGLMLVGVASSANFDELFQPSWALDHFVREGELLKLRLDNYSGAGFVSKNKYMFGKVTIQLKLVEGDSAGTVAAFYMSSEGPNHNEFDFEFLGNTSGEPYSVQTNLYVNGVGNREQRLNLWFDPTKEFHNYSIFWNQCQVVFLVDETPIRVHTNMEHKGIPFPKDQAMGVYSSIWNADDWATQGGRVKTDWSHAPFIITYKAFEINACECPVSGAAVENTRKCSSSEDKKYWWDQPTLSELSFHQSHQLMWVRANHMVYDYCSDTARFPQTPAECVHHIHRH 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g02103 290 CDD GH16_XET 17 283 IPR016455 GO:0010411|GO:0016762|GO:0042546
Bva07g02103 290 PRINTS Glycosyl hydrolase family 16 signature 128 145 IPR008264 GO:0004553|GO:0005975
Bva07g02103 290 PRINTS Glycosyl hydrolase family 16 signature 110 123 IPR008264 GO:0004553|GO:0005975
Bva07g02103 290 PRINTS Glycosyl hydrolase family 16 signature 52 70 IPR008264 GO:0004553|GO:0005975
Bva07g02103 290 Pfam Glycosyl hydrolases family 16 26 200 IPR000757 GO:0004553|GO:0005975
Bva07g02103 290 Pfam Xyloglucan endo-transglycosylase (XET) C-terminus 236 283 IPR010713 GO:0005618|GO:0006073|GO:0016762|GO:0048046
Bva07g02103 290 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 16 287 - -
Bva07g02103 290 PIRSF EndGlu_transf 4 288 IPR016455 GO:0010411|GO:0016762|GO:0042546
Bva07g02103 290 Gene3D - 12 288 - -
Bva07g02103 290 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 8-RELATED 16 287 IPR044791 GO:0004553
Bva07g02103 290 SUPERFAMILY Concanavalin A-like lectins/glucanases 22 287 IPR013320 -
Bva07g02103 290 ProSiteProfiles Glycosyl hydrolases family 16 (GH16) domain profile. 2 208 IPR000757 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g02103 Bva-Chr7 17903816 17906181 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g02103 52 288 Glycoside Hydrolase AT4G03210 74.262 2.35e-137 387
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g02103 K08235 - gmx:100527891 528.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva07g02103 07 17903816 17906181 Bva09g00535 09 2861995 2864621 BWGD
Bva07g02103 07 17903816 17906181 Bva07g02103 07 17903816 17906181 ECH