Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g00461 ATGGATTGTTCCATCGATGGCGTCACAAAGCTCCTATTATTCTCCGGCTATGTTGTACTTATTCTCTCCGGTATTCCCCTTGCATTGTCGGAAAAGGCAAATCCTAGAACGTCGGTGGCTTCTTCTGGAAACTCCGGTCAGATAAACTCTAACTCAGTTCTGGTGGCTCTTCTGGACTCGCATTATACTGAGCTTGCTGAGCTGGTCGAGAAGGCTATGCTGTTGCAGACTCTCGAAGAAACTGTCGGCAGCCACAACATCACCATTTTCGCTCCCAGGAACGAAGCTCTCGAGCGCGATCTCGACCCAGAGTTCAAGCGCTTTCTTCTCGAACCCGGTAATCTCAAGTCTTTGCAAACTTTGCTCATGTTCCATATTATCCCGACCCGTATTGGATCGAAACAGTTGCTTGATAAAACCGGGTCAGCCCGCCACGAGACGCTCTCGAAGGGTTATCTCCATCTGGAAAGTAATGGGACCGGAGAATGGACAGTGGATCGCGCCAAGGTTATTCACCCATACGTGGTGACCCGACCCGATGGTGTCATCCACGGTATTGAACGCCTCTTGGTTCCTCAAGCAGTAGTAGACGACTTCAACCGCCGGCGAAGTCTAGTTTCTATCACGGCGGTTAAACCAGAGGGTGCACCGGAAGTCGACCCAAGGACGCATCGGCTCAAGAAACCAGCTCCACCGGCGAAACCCGGTTCGGCACCGGCGTTGCCAATCTATGATGCTTTGGCTCCTGGACCATCACTTGCGCCAGCTCCGGCACCGGGACCGGGTGGTCCGCACCACCACTTTAACGGAGAGAGACAAGTTAAGGATTTCATTCAGACCTTGCTCCATTACGGTGGGTACAACGAACTGGCGGATATTCTGGTAAATTTAACTTCCTTGGCTACGGAAATGGGTCGGTTAGTCTCGGAGGGATACGTGCTCACTGTTTTGGCTCCCAATGACGAGGCTATGGCGAAATTGACCACGGACCAATTGAGCGAACCGGGTGCACCcgaacaaataatatattaccaTCTCGTACCAGAATACCAGACCGAAGAGAGTATGTACAATGCAGTTCGCCGGTTCGGAAAGGTCCGGTACGATACTCTACGATTGCCGCATAAGGTGGTGGCCCAGGAGGCAGATGGGTCTGTCAAATTCGGGCATGGAGACGGATCGGCGTATTTGTTCGACCCGGATATTTATACAGATGGCCGGATCTCGGTGCAGGGGATCGATGGCGTTCTGTTCCCACCGGAGGAGGAGGGGGAGGCAAAACCCGTTACCCGAACGGTTCAACCCGCCAAGGTCGTGATCAAGCATAGAAGAGGAAAATTGCTGGAAGCCGCATGCTGGATGCTTGGAACCTTTGGACAGGATTCTAGATTCACCAGTTGTCATTG 1406 0.5192 MDCSIDGVTKLLLFSGYVVLILSGIPLALSEKANPRTSVASSGNSGQINSNSVLVALLDSHYTELAELVEKAMLLQTLEETVGSHNITIFAPRNEALERDLDPEFKRFLLEPGNLKSLQTLLMFHIIPTRIGSKQLLDKTGSARHETLSKGYLHLESNGTGEWTVDRAKVIHPYVVTRPDGVIHGIERLLVPQAVVDDFNRRRSLVSITAVKPEGAPEVDPRTHRLKKPAPPAKPGSAPALPIYDALAPGPSLAPAPAPGPGGPHHHFNGERQVKDFIQTLLHYGGYNELADILVNLTSLATEMGRLVSEGYVLTVLAPNDEAMAKLTTDQLSEPGAPEQIIYYHLVPEYQTEESMYNAVRRFGKVRYDTLRLPHKVVAQEADGSVKFGHGDGSAYLFDPDIYTDGRISVQGIDGVLFPPEEEGEAKPVTRTVQPAKVVIKHRRGKLLEAACWMLGTFGQDSRFTSCH 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g00461 468 Pfam Fasciclin domain 61 192 IPR000782 -
Bva09g00461 468 Pfam Fasciclin domain 309 419 IPR000782 -
Bva09g00461 468 ProSiteProfiles FAS1/BIgH3 domain profile. 49 190 IPR000782 -
Bva09g00461 468 SUPERFAMILY FAS1 domain 51 192 IPR036378 -
Bva09g00461 468 SMART fasc_3 315 420 IPR000782 -
Bva09g00461 468 SMART fasc_3 88 193 IPR000782 -
Bva09g00461 468 Gene3D FAS1 domain 53 193 IPR036378 -
Bva09g00461 468 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 16 23 467 - -
Bva09g00461 468 SUPERFAMILY FAS1 domain 253 421 IPR036378 -
Bva09g00461 468 ProSiteProfiles FAS1/BIgH3 domain profile. 274 402 IPR000782 -
Bva09g00461 468 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 16 23 467 IPR044654 -
Bva09g00461 468 MobiDBLite consensus disorder prediction 214 241 - -
Bva09g00461 468 Gene3D FAS1 domain 266 420 IPR036378 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g00461 Bva-Chr9 2468955 2472098 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g00461 - - zju:107410262 687.182
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00461 09 2468955 2472098 Bva07g02180 07 18271775 18275183 BWGD