Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g02180 ATGGATTGTCCCTTCTGTGGCGTCACAAAGCTCCAGATATTATTCGGCtattttctgcttcttttctcCGGTATTCCCCTTGCATTGTCGCAAAGTACGAATCCTAATCCTAGGACGTCGGTGGCTACTTCTTCCGCAAACTCCGGTCAGATAAACTCTAACTCAGTTCTGGTAGCTCTTCTGGACTCGCATTATACCGAACTTGCCGAACTGGTCGAGAAGGCTATGCTTTTGCATACACTCGAAGAAACTGTCGGCAGCCACAATATTACCATTTTCGCTCCTCGGAACGAAGCTCTCGAGCGCGATCTCGATCCGGAGTTTAAGCGCTTCCTTCTCGAACCTGGTAACCTCAAGTCTTTGCAAACTTTGCTCATGTTTCATATCATCCCGACCCGTATTGGATCGAAACAGTTGCCTGGTAAAACCGGGTCAACCAGCCACGAGACTCTGTCGAAGGATTATTTGCATCTGAAAAATAATGGGACCGGAGAATGGACAGTGGATAGCGCCAAGATTATTCACCCAGACGTTGTGACCCGACCCGACGGTGTCATCCACGGGATTGAGCGCCTCTTGGTCCCTCGTGCAGTAGTAGACGACTTCAACCGCCGGCGGAGTCTCGTTTCCATCACGGCGGTTAAACCGGAGGGTGCACCGGAAGTGGACCCAAGGACGCATCGCCTAAAGAAGCCAGCTCCACCGGCGAAACCAGGTTCGGCACCGGCGTTGCCAATCTACGATGCTCTGGCTCCTGGACCATCACTTGCACCAGCTCCGGCACCGGGACCTGGTGGGCCACACCACCACTTTAACGGAGAGAGACAAGTTAAGGATTTCATTCAGACCCTGCTCCATTACGGTGGATACAACGAACTGGCGGATATTCTGGTAAATCTAACTTCCTTGGCTACAGAAATGGGTCGGTTAGTCTCGGAGGGATACGTTCTCACCGTTTTGGCTCCCAATGATGAGGCTATGGCGAAATTGACCACGGACCAGTTGAGCGAACCGGGTGCACCCGAACAGATAATATACTACCATCTCGTACCCGAGTACCAGACAGAAGAGAGTATGTACAATGCGGTTCGGAGGTTCGGGAAGGTCAGGTATGATACTCTGCGATTGCCGCATAAGGTGGTTGCCCAGGAAGCAGATGGGTCTGTCAAATTCGGGCATGGAGACGGGTCGGCTTATTTGTTCGACCCGGATATATATACGGATGGCCGGATCTCGGTGCAGGGGATCGATGGCGTTTTGTTCCCACCGGAGGAGGAGGGGGAGGGGGAGGCGAAACCCGTTACCGGAACGGTTCAACCCGCCAAGGTCGTGGTCAAGCACAGAAGAGGAAAATTGCTAGAAGCCGCATGCTGGATGCTTGTAACCTTCGGACAGGACTCTAGATTCACCTCTTGCCATTG 1421 0.5208 MDCPFCGVTKLQILFGYFLLLFSGIPLALSQSTNPNPRTSVATSSANSGQINSNSVLVALLDSHYTELAELVEKAMLLHTLEETVGSHNITIFAPRNEALERDLDPEFKRFLLEPGNLKSLQTLLMFHIIPTRIGSKQLPGKTGSTSHETLSKDYLHLKNNGTGEWTVDSAKIIHPDVVTRPDGVIHGIERLLVPRAVVDDFNRRRSLVSITAVKPEGAPEVDPRTHRLKKPAPPAKPGSAPALPIYDALAPGPSLAPAPAPGPGGPHHHFNGERQVKDFIQTLLHYGGYNELADILVNLTSLATEMGRLVSEGYVLTVLAPNDEAMAKLTTDQLSEPGAPEQIIYYHLVPEYQTEESMYNAVRRFGKVRYDTLRLPHKVVAQEADGSVKFGHGDGSAYLFDPDIYTDGRISVQGIDGVLFPPEEEGEGEAKPVTGTVQPAKVVVKHRRGKLLEAACWMLVTFGQDSRFTSCH 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g02180 473 Gene3D FAS1 domain 269 423 IPR036378 -
Bva07g02180 473 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 17 33 473 - -
Bva07g02180 473 ProSiteProfiles FAS1/BIgH3 domain profile. 52 193 IPR000782 -
Bva07g02180 473 Pfam Fasciclin domain 64 195 IPR000782 -
Bva07g02180 473 Pfam Fasciclin domain 312 422 IPR000782 -
Bva07g02180 473 SMART fasc_3 91 196 IPR000782 -
Bva07g02180 473 SMART fasc_3 318 423 IPR000782 -
Bva07g02180 473 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 16 33 473 IPR044654 -
Bva07g02180 473 ProSiteProfiles FAS1/BIgH3 domain profile. 277 405 IPR000782 -
Bva07g02180 473 SUPERFAMILY FAS1 domain 256 424 IPR036378 -
Bva07g02180 473 Gene3D FAS1 domain 56 196 IPR036378 -
Bva07g02180 473 MobiDBLite consensus disorder prediction 217 247 - -
Bva07g02180 473 SUPERFAMILY FAS1 domain 55 195 IPR036378 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g02180 Bva-Chr7 18271775 18275183 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g02180 - - zju:107410262 686.411
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00461 09 2468955 2472098 Bva07g02180 07 18271775 18275183 BWGD