Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g00350 ATGCAGGCTCTTTCTCGCCCTTTTCCCGGTTCCGGCAGCTATCTAGTTAGGACTCGTCCTTCATCGAATCGGGTCGGCCCGAACCGAATTATCGTCAAATGCGCTTATGGCTTCGAATCCCCCGCGTTTCCCCTTGGAGTCGGCTCCAATCGAGCTGACTGGCAGAGCTCCTGCGCCATCTTAGCTAGTAAGGTCACACAAGAACAGTCTCCTACTCAGAAACACGACGGTAGTGCTGATCACGTCGCCGCCGTTAACGGCCACAAGGCTGCCGTAACTGAACTTGTCCCCATAGGTAACCTTGGCAGCAGCGACAATAACAAGCCGCTTCCACCTAAGCCGCTCACCATTTCAGATCTCGCGCCGGCTCCGATGCACGGCTCCCAGCTACGCGTGGCCTATCAGGGTGTTCCCGGAGCTTACTCGGAAGCCGCTGCCGGCAAGGCTTATCCGAACTGCGAAGCCATTCCTTGTGACCAATTCGAGGTAGCTTTCCAAGCGGTGGAACTCTGGATCTCCGATCGAGCAGTTCTCCCGGTAGAGAACTCCCTTGGCGGTTCCATCCACCGGAACTACGACCTACTCCTCCGTCACCGCCTTCACATCGTCGGAGAAGTCCAACTGCCAGTCCATCACTGCCTGCTAGCACTACCTGGAGTGCGAAAAGAGTTCCTAACCCGCGTGATATCCCATCCACAAGCCCTTGCCCAGTGCGAGAATACATTAACCAAAATGGGTCTCAAAGTCGCCCGTGAAGCCGTGGACGACACCGCCGGCGCTGCAGAATTCGTAGCCACCAACAATCTCCGCGATACGGCGGCAATTGCCAGCGCACGCGCGGCGGAGCTGTACGGAATGCAGGTTTTGGCCGATGGGATCCAGGACGACCCGAGTAACGTGACCCGATTCGTGATGCTGGCCCGGGAACCGATAATACCTCGTACGGACAGACCATTCAAGACGAGCATAGTTTTCGCACACGATAAGGGCATGTCAGTGCTATTCAAGGTATTGTCAGCGTTTGCCTTCAGGAACATTAGCTTGACGAAGATCGAGTCGAGGCCTCACCGTAACCGTCCGATCAGGCTTGTGGATGATGCCAATGTGGGGACTGCAAAACACTTCGAGTACATGTTCTACGTAGATTTTGAAGCTTCCATGGCGGAAGTTAGGGCCCAAAATGCCTTAGCGGAGGTGCAGGAGTTCACGTCTTTCTTGAGGGTATTGGGTAGCTATCCTATGGACATGACACCGTGGAGTCCTTCGTCTTGCCTCCGGGAAGATTA 1286 0.5529 MQALSRPFPGSGSYLVRTRPSSNRVGPNRIIVKCAYGFESPAFPLGVGSNRADWQSSCAILASKVTQEQSPTQKHDGSADHVAAVNGHKAAVTELVPIGNLGSSDNNKPLPPKPLTISDLAPAPMHGSQLRVAYQGVPGAYSEAAAGKAYPNCEAIPCDQFEVAFQAVELWISDRAVLPVENSLGGSIHRNYDLLLRHRLHIVGEVQLPVHHCLLALPGVRKEFLTRVISHPQALAQCENTLTKMGLKVAREAVDDTAGAAEFVATNNLRDTAAIASARAAELYGMQVLADGIQDDPSNVTRFVMLAREPIIPRTDRPFKTSIVFAHDKGMSVLFKVLSAFAFRNISLTKIESRPHRNRPIRLVDDANVGTAKHFEYMFYVDFEASMAEVRAQNALAEVQEFTSFLRVLGSYPMDMTPWSPSSCLRED 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g00350 428 SUPERFAMILY Periplasmic binding protein-like II 131 314 - -
Bva09g00350 428 Pfam Prephenate dehydratase 132 310 IPR001086 GO:0004664|GO:0009094
Bva09g00350 428 ProSitePatterns Prephenate dehydratase signature 2. 348 355 IPR018528 GO:0004664|GO:0009094
Bva09g00350 428 CDD ACT_CM-PDT 320 413 - -
Bva09g00350 428 PANTHER AROGENATE DEHYDRATASE 11 423 - -
Bva09g00350 428 PANTHER PREPHENATE DEHYDRATASE P PROTEIN 11 423 - -
Bva09g00350 428 ProSiteProfiles ACT domain profile. 322 413 IPR002912 -
Bva09g00350 428 Gene3D - 126 214 - -
Bva09g00350 428 CDD PBP2_Ct-PDT_like 131 310 - -
Bva09g00350 428 Gene3D - 215 296 - -
Bva09g00350 428 MobiDBLite consensus disorder prediction 1 22 - -
Bva09g00350 428 ProSiteProfiles Prephenate dehydratase domain profile. 131 308 IPR001086 GO:0004664|GO:0009094
Bva09g00350 428 Gene3D - 315 416 - -
Bva09g00350 428 ProSitePatterns Prephenate dehydratase signature 1. 284 306 IPR018528 GO:0004664|GO:0009094
Bva09g00350 428 SUPERFAMILY ACT-like 303 415 IPR045865 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g00350 Bva-Chr9 1847197 1849056 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g00350 K05359 - gmx:100797636 697.582
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00350 09 1847197 1849056 Bva07g02298 07 18891436 18893242 BWGD
Bva09g00350 09 1847197 1849056 Bva09g00350 09 1847197 1849056 ECH