Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g02298 ATGCAGGCTCTTTCCCACCCTTCTTCCGGTACCGGTAGTCTCAACTATCTAGTCCGGACTCGTCCCTCTTCGAATCGGATTGTTCCGAACCGAATTATCATCAAATGTGGTTACGGCTTCGAATCCCCCGCCTTCCCCCTCGGAGTCGGCTCCAATCGAGCTGACTGGCAGAGCTCCTGCGCCATCTTAGCTAGTAAGGTCTCACAAGAACAGTCTTCTACTCAGAAAAACGGTGGCAATGCTGACCACGTCGCCGCTGTTAACGGACACAAGGCCGCCGTAACTGACCTCAACCTTGTACCCATCGGTAACCTTGGTAGTAGCGACAATAACAAGCCGATTCCACCCAAGCCGCTCACCATTTCAGATCTATCGCCGGCTCCGATGCACGGCTCGCAGCTACGTGTGGCGTATCAAGGTGTTCCCGGAGCTTACTCGGAAGCGGCTGCCGGCAAGGCCTATCCGAACTGCGAAGCCATTCCTTGCGACCAATTCGAGGTAGCTTTCCAAGCGGTGGAGCTCTGGATCGCTGATCGAGCAGTTCTTCCGGTTGAGAACTCCCTTGGTGGTTCGATCCACCGGAACTACGACCTACTCCTCCGTCACCGCCTCCACATCGTCGGGGAAGTACAACTTCCAGTCCACCACTGCCTGCTAGCACTACCTGGAGTGCGGAAAGAATTCCTAACCCGCGTGATTTCTCATCCACAAGCCCTTGCCCAGTGCGAGCACACACTAACAAAATTGGGTCTAAATGTCGCCCGTGAAGCCGTGGACGACACTGCGGGAGCCGCTGAATTCGTAGCCGCCAACAACCTACGCGATACGGCAGCAATTGCCAGTGCACGCGCCGCGGAGCTGTACGGATTGCAGGTTTTGGCAGATGGGATCCAGGACGACCCGAGTAATGTGACCCGATTCGTGATGCTGGCCCGGGAACCCATAATACCGCGTACGGATAGGCCATTCAAGACGAGCATCGTTTTCGCACACGATAAGGGCACGTCAGTGCTGTTCAAGGTATTGTCAGCGTTCGCCTTCAGGAACATTAGCTTGACGAAGATTGAGTCGAGGCCTCACCGGAACCGTCCAATTAGGCTTGTGGATGATGCGAATGTGGGGACCGCAAAACACTTCGAGTACATGTTCTACGTAGATTTTGAAGCTTCCATGGCGGAAGTTAGAGCCCAAAATGCCTTAGCGGAGGTGCAGGAGTTCACTTCTTTCTTGAGGGTATTGGGTAGCTATCCTATGGACATGACACCTTGGAGTCCTTCGTCTTGCCCACGGGAAGATTA 1298 0.5447 MQALSHPSSGTGSLNYLVRTRPSSNRIVPNRIIIKCGYGFESPAFPLGVGSNRADWQSSCAILASKVSQEQSSTQKNGGNADHVAAVNGHKAAVTDLNLVPIGNLGSSDNNKPIPPKPLTISDLSPAPMHGSQLRVAYQGVPGAYSEAAAGKAYPNCEAIPCDQFEVAFQAVELWIADRAVLPVENSLGGSIHRNYDLLLRHRLHIVGEVQLPVHHCLLALPGVRKEFLTRVISHPQALAQCEHTLTKLGLNVAREAVDDTAGAAEFVAANNLRDTAAIASARAAELYGLQVLADGIQDDPSNVTRFVMLAREPIIPRTDRPFKTSIVFAHDKGTSVLFKVLSAFAFRNISLTKIESRPHRNRPIRLVDDANVGTAKHFEYMFYVDFEASMAEVRAQNALAEVQEFTSFLRVLGSYPMDMTPWSPSSCPRED 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g02298 432 PANTHER PREPHENATE DEHYDRATASE P PROTEIN 12 427 - -
Bva07g02298 432 Pfam Prephenate dehydratase 136 314 IPR001086 GO:0004664|GO:0009094
Bva07g02298 432 ProSitePatterns Prephenate dehydratase signature 2. 352 359 IPR018528 GO:0004664|GO:0009094
Bva07g02298 432 CDD ACT_CM-PDT 324 417 - -
Bva07g02298 432 ProSitePatterns Prephenate dehydratase signature 1. 288 310 IPR018528 GO:0004664|GO:0009094
Bva07g02298 432 SUPERFAMILY ACT-like 307 419 IPR045865 -
Bva07g02298 432 SUPERFAMILY Periplasmic binding protein-like II 135 318 - -
Bva07g02298 432 Gene3D - 130 218 - -
Bva07g02298 432 ProSiteProfiles Prephenate dehydratase domain profile. 135 312 IPR001086 GO:0004664|GO:0009094
Bva07g02298 432 Gene3D - 219 300 - -
Bva07g02298 432 CDD PBP2_Ct-PDT_like 135 314 - -
Bva07g02298 432 PANTHER AROGENATE DEHYDRATASE 12 427 - -
Bva07g02298 432 ProSiteProfiles ACT domain profile. 326 417 IPR002912 -
Bva07g02298 432 Gene3D - 319 420 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g02298 Bva-Chr7 18891436 18893242 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g02298 K05359 - gmx:100797636 726.857
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00350 09 1847197 1849056 Bva07g02298 07 18891436 18893242 BWGD
Bva07g02298 07 18891436 18893242 Bva07g02298 07 18891436 18893242 ECH