Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g00295 ATGCCATCATCACTTCCCTATTTCCCCCTAATGGCTCCTCACTTCTTTCTTGTATTCTTTCTCATGATTTTTTCAGGTAGTGCTCAGGATCCACCTTCACCTGGCTACTACCCAAGTTCCAAAATTGCCTCTGTTAACTTTAACCAAGGTTTTAGAAACCTGTGGGGATCTCAGCATATGAAACTAGACCAGGACTCATTAACCATTTGGCTTGATTCTAATTCAGGAAGTGGATTCAAGTCACTGCACTCGTATCGATCTGGATACTTCAGTGCTGCAATGAAGCTTCAACCTGGTTATACTGCAGGAGTCATTACATCTCTCTACCTTTCAAACAACCAAGACCACCCAGGAAACCATGATGAAATTGACATTGAATTCCTCGGTACGACACCTGGTAAGCCATATGTCTTGCAGACAAACGTGTACATCAGAGGAAGTGGAGATGGGAACATCATAGGCAGAGAGTTGAGGTTTCATCTCTGGTTCGACCCAACACAAGATTTCCACAACTATGCTATTCTATGGAAACCCAGTGAGATAATaTTCCTCGTGGATGATGTCCCTATAAGAAGGTATCCTAGGAAGAGTGATGCCACATTCCCTACAAGGCCAATGTATTTGTATGGATCAATATGGGACGCATCTTCCTGGGCCACAGAAGATGGAAAATACAAAGCTGACTACACATACCAACCCTTTATAGGTAggtacaaaaatttcaaactgcAGGGTTGCACAGCTGATGGCCCTTCCTCATGCCAACCACCCTCTGTCTCACCTTCTGGCTCTAGCAGCCTCAGCCCTCAGCAGAACGCAGCCATGCAATGGGTCCAGAACAACTATTTGGTTTATAACTACTGCCATGACCCCAGCAGAGACCACAACCTTACCCCAGAGTGCTA 905 0.442 MPSSLPYFPLMAPHFFLVFFLMIFSGSAQDPPSPGYYPSSKIASVNFNQGFRNLWGSQHMKLDQDSLTIWLDSNSGSGFKSLHSYRSGYFSAAMKLQPGYTAGVITSLYLSNNQDHPGNHDEIDIEFLGTTPGKPYVLQTNVYIRGSGDGNIIGRELRFHLWFDPTQDFHNYAILWKPSEIIFLVDDVPIRRYPRKSDATFPTRPMYLYGSIWDASSWATEDGKYKADYTYQPFIGRYKNFKLQGCTADGPSSCQPPSVSPSGSSSLSPQQNAAMQWVQNNYLVYNYCHDPSRDHNLTPEC 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g00295 301 Gene3D - 27 301 - -
Bva09g00295 301 Pfam Glycosyl hydrolases family 16 48 230 IPR000757 GO:0004553|GO:0005975
Bva09g00295 301 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 8-RELATED 15 301 IPR044791 GO:0004553
Bva09g00295 301 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 31 15 301 - -
Bva09g00295 301 PIRSF EndGlu_transf 12 301 IPR016455 GO:0010411|GO:0016762|GO:0042546
Bva09g00295 301 ProSiteProfiles Glycosyl hydrolases family 16 (GH16) domain profile. 26 238 IPR000757 GO:0004553|GO:0005975
Bva09g00295 301 Pfam Xyloglucan endo-transglycosylase (XET) C-terminus 265 301 IPR010713 GO:0005618|GO:0006073|GO:0016762|GO:0048046
Bva09g00295 301 SUPERFAMILY Concanavalin A-like lectins/glucanases 46 301 IPR013320 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g00295 Bva-Chr9 1535978 1537763 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g00295 15 301 Glycoside Hydrolase AT3G44990 67.944 6.98e-147 412
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g00295 K08235 - gmx:100776165 514.612
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00295 09 1535978 1537763 Bva07g02349 07 19173652 19175496 BWGD
Bva09g00295 09 1535978 1537763 Bva09g00295 09 1535978 1537763 ECH