Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g02349 ATGGCTCCTCTCCTGTCTCTTATATTCtctatgatgatgatgattttttCAGTTAGTGCTCAGGGTCCATCTGCACCTGGCTACTATCCAAGTTCCAAAATTGGCTCTATTAGCTTTAACCAAGGATTTAGAAACCTCTGGGGACCTCAGCACCAGAGACTTGAACAGGACTCATTAACAATCTGGCTTGACTCTACTTCAGGAAGTGGATTCAAGTCACTGCACTCGTATCAATCTGGATACTTTGGTGCTGCAATTAAGCTTCAAGCTGGTTATACTGCAGGAGTCATTACATGTCTCTACCTTTCAAACAACCAAGACTACCCGGGAAACCATGATGAAGTTGACATTGAGTTCCTTGGTACTACACCTGGTAAACAGTATGTCTTGCAGACAAACGTGTACATCAGAGGAAGTGGAGATAGGAACATCATAGGAAGAGAGTTGAGGTTTCATCTCTGGTTCGACCCAACACAAGATTTCCACAACTATGGTATTCTATGGAAACCCAGTGagataatATTCCTGGTGGATGATGTCCCTATAAGAAGGTATCCTAGGAAGAGCGATGCTACATTCCCAACAAGGCCAATGTATCTGTACGGATCAATATGGGACGCATCTTCCTGGGCTACAGAGAATGGAAAATACAAAGCTGATTACAGATACCAACCCTTCATCGGTAggtacaaaaatttcaaactgcAGGGTTGCACAGCCGGAGGCCCCTCCTCATGCCGACCACCCTCTGGCTCACCTCCTGGCTTTGGCAGCCTGAGCCCTCAGCAGTACGCAGCCATGCAATGGGTCCAAAACAACTATTTGGTTTATGACTATTGCCATGACCAAAGCAGAGATCACAACCTTACTCCAGAATGCTA 881 0.4359 MAPLLSLIFSMMMMIFSVSAQGPSAPGYYPSSKIGSISFNQGFRNLWGPQHQRLEQDSLTIWLDSTSGSGFKSLHSYQSGYFGAAIKLQAGYTAGVITCLYLSNNQDYPGNHDEVDIEFLGTTPGKQYVLQTNVYIRGSGDRNIIGRELRFHLWFDPTQDFHNYGILWKPSEIIFLVDDVPIRRYPRKSDATFPTRPMYLYGSIWDASSWATENGKYKADYRYQPFIGRYKNFKLQGCTAGGPSSCRPPSGSPPGFGSLSPQQYAAMQWVQNNYLVYDYCHDQSRDHNLTPEC 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g02349 293 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 31 6 293 - -
Bva07g02349 293 ProSiteProfiles Glycosyl hydrolases family 16 (GH16) domain profile. 18 230 IPR000757 GO:0004553|GO:0005975
Bva07g02349 293 SUPERFAMILY Concanavalin A-like lectins/glucanases 38 293 IPR013320 -
Bva07g02349 293 Gene3D - 19 293 - -
Bva07g02349 293 Pfam Glycosyl hydrolases family 16 40 222 IPR000757 GO:0004553|GO:0005975
Bva07g02349 293 Pfam Xyloglucan endo-transglycosylase (XET) C-terminus 258 293 IPR010713 GO:0005618|GO:0006073|GO:0016762|GO:0048046
Bva07g02349 293 PIRSF EndGlu_transf 2 293 IPR016455 GO:0010411|GO:0016762|GO:0042546
Bva07g02349 293 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 8-RELATED 6 293 IPR044791 GO:0004553
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g02349 Bva-Chr7 19173652 19175496 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g02349 5 293 Glycoside Hydrolase AT3G44990 67.010 1.02e-141 399
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g02349 K08235 - gmx:100781528 493.426
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00295 09 1535978 1537763 Bva07g02349 07 19173652 19175496 BWGD
Bva07g02349 07 19173652 19175496 Bva07g02349 07 19173652 19175496 ECH