Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g00220 ATGGATTTGGTAAATAGTTGCAAGGAAAAATTGACATATTTTCGCATAAAGGAGCTCAAGGATGTGCTCACCCAACTAGGACTTTCGAAGCAGGGGAAGAAGCAGGATCTTGTTGATCGGATATTAGCAATTCTCTCAGATGACCAAGTTTCCAAAATGTGGGCCAAGAGGAATGCTGTTTCAAAAGAACAAGTGGCAAAACTTGTGGATGACACCCATAGAAAAATGCAGATATCTGGGGCTACTGATCTAGCTTCAAAGGGTCAGGGAGCCTCAGATAGTagtaatgtaaaaattaaaggtGAAATTGATGATTCCTTTCAGTCAGACATGAAGATTCGCTGTCTCTGTGGAAGTTCATTGGAAACGGAGCCCTTGATTAAGTGTGAGGATACAAGGTGCCATGTGTGGCAACACATTGGTTGTGTTATAATTCCAGAGAAGCCTATGGAAGGCATCCCGCCAGATCCTGAATTATTTTACTGTGAAATCTGTCGACTCAGCCGAGCTGATCCTTTTTGGTATTCAGTGTGCCACCCTTTATATCCTGTGAAGTTGACCACAAGCAGCATTCCAACTGATGGAGCCAATCCGGTGCAGAGTGTGGAGAAAACATTTCAGATTACTAGAGCAGACAAGGACTTATTGTCTAAACAAGAGCATGATGTTCAGGCATGGTGTATGCTTCTGAACGATAAGGTTCCATTCAGGATGCAGTGGCCACAATATACAGATCTACAGGTCAATGGTATGCCTGTTCGTGCAATTAACAGGCCTGGTTCACAATTGCTTGGGGCTAATGGTCGTGATGATGGTCCAATTATCACGCAGTATACAAAAGACGGAATTAATAAGATTTCCTTAACAGGATGTGATGCtcgtattttttgtttgggagTGCGCATTGTTAAAAGGCGCAGCATGCAACAGATCCTAAACATGATTCCAAAGGAGTCTGAAGGTGAGCGTTTTGAAGATTCTTTAGCACGTGTCATTCGATGTGTTGGTGGTGGAAATGCAAGAGATAATGCTGATAGTGACAGTGATTTGGAAGTTGTTTCCGATACTTTTACCGTCAACCTACGCTGTCCAATGAGTGGTTCCAGAATGAAGATTGCTGGAAGATTCAAACCTTGTGTGCATATGGGGTGTTTTGACCTTGAAGTTTTTGTGGAAATGAATCAACGTTCAAGGAAaTGGCAATGCCCCATATGTCTAAAAAACTCCTCATTAGAGAATATCGTTATTGATCCTTATTTTAATCGTATCACATCACTGATGAGACTTTGTGGTGAAGATGTCACAGATGTTGAGGTGAAGCCTGATGGTTCTTGGCGTGTCAAGGCTAAGAGTGAAAGTGAACGCCGGGATCTAGGGATCCTTTCACAATGGCACTTTCCTGATGGCACTCTATGTATTTCTACTGATGGAGAAGTTAGAAGAGTGGAAACATTGAAGCAGATCAAACATGAAGGTGTTTCAGACAGTCCTAATGGTTTAAAACTTGGCATTAGGAAAAATTGCAATGGAGTTTGGAAAGTCAGCAAACCCGAGGACACAAACACTTCTTCaggtaataatatattgaaagaAAACGATGGAAATCCTCAACATGTGGTTATTCCGATGAGCAGCAGTGCCACTGGAAGTGGCCGGGATGGTGATGATCCTAGTGTGAATCAGGGTGCGGGTGGGCAACTTGATTTCGAGATGGATTCTATTTCCCTCAATGTTAACTCAGCTTATGGGTTTACTGACCATAACACTTCTGCTCCAATGGGGAATGCTGAAGTTATTGTTCTTAGTGATTCTGAAGAGGAAAACGACATATTGATTTCTGGAACTTCATACAAGAATAATGCAAGGGATGCTGGAGTTACTTATTCTGTTCCCCCAGCTGGAATTGCTGATTCATATGTTGATGATCCCACCCTTGGTGGAAATTCGTTTGGACTTTTTAATCCTAATGATGATGATTATGGGATGCCTACTCTGTGGTCGTTGCCTTCTGGATCTCAGGGAGGTCCAGGATTCCAATTATTCAATTCTGATGCGGAGGTACCTGATGCAATGGTCCATTTGCAGCATGGTCCTATCAATTGTTCTGCGTCAATGAATGGTTATGCATTGGCTCCAGATGCTGCCTTGGAATCTAATACTCTCATTCCTGACTCCTCTGCAAGTAGATCTGATCCTGATTTGAATGGTGGATTAGTTGACAATCCATTGGCATTTGCTGGAGATGATCCCTCACTTCAGATTTTTCTTCCTACTAGACCCGCAGAATCATCAATACAGCATGAACTAAGAGATCGGGCGGATGTGTCCAATGGTGTCTGCAATGAGGATTGGATTTCTCTTAGACTTGGAGGTGCTGCTAGCGGTGGTAACGGTGAGCCTACAACTGCAAATGGGTTGAATTCTAGACAGCAAATGCCATCAAGAGACAATGCTACAGATACTTTGGCCGACACTGCTTCTTTGCTTCTCGGTATGAATGATGCTAGATCTGACAAGACAAGTAGGCAAAGATCTGATAGCCCTTTCTCATTTCCCCGCCAAAAACGTTCAAAATTGAAGGAAGCTGACAGGCATTTTTG 2600 0.4212 MDLVNSCKEKLTYFRIKELKDVLTQLGLSKQGKKQDLVDRILAILSDDQVSKMWAKRNAVSKEQVAKLVDDTHRKMQISGATDLASKGQGASDSSNVKIKGEIDDSFQSDMKIRCLCGSSLETEPLIKCEDTRCHVWQHIGCVIIPEKPMEGIPPDPELFYCEICRLSRADPFWYSVCHPLYPVKLTTSSIPTDGANPVQSVEKTFQITRADKDLLSKQEHDVQAWCMLLNDKVPFRMQWPQYTDLQVNGMPVRAINRPGSQLLGANGRDDGPIITQYTKDGINKISLTGCDARIFCLGVRIVKRRSMQQILNMIPKESEGERFEDSLARVIRCVGGGNARDNADSDSDLEVVSDTFTVNLRCPMSGSRMKIAGRFKPCVHMGCFDLEVFVEMNQRSRKWQCPICLKNSSLENIVIDPYFNRITSLMRLCGEDVTDVEVKPDGSWRVKAKSESERRDLGILSQWHFPDGTLCISTDGEVRRVETLKQIKHEGVSDSPNGLKLGIRKNCNGVWKVSKPEDTNTSSGNNILKENDGNPQHVVIPMSSSATGSGRDGDDPSVNQGAGGQLDFEMDSISLNVNSAYGFTDHNTSAPMGNAEVIVLSDSEEENDILISGTSYKNNARDAGVTYSVPPAGIADSYVDDPTLGGNSFGLFNPNDDDYGMPTLWSLPSGSQGGPGFQLFNSDAEVPDAMVHLQHGPINCSASMNGYALAPDAALESNTLIPDSSASRSDPDLNGGLVDNPLAFAGDDPSLQIFLPTRPAESSIQHELRDRADVSNGVCNEDWISLRLGGAASGGNGEPTTANGLNSRQQMPSRDNATDTLADTASLLLGMNDARSDKTSRQRSDSPFSFPRQKRSKLKEADRHF 866
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g00220 866 MobiDBLite consensus disorder prediction 722 742 - -
Bva09g00220 866 CDD PHD_Bye1p_SIZ1_like 114 165 - -
Bva09g00220 866 MobiDBLite consensus disorder prediction 515 566 - -
Bva09g00220 866 Pfam MIZ/SP-RING zinc finger 359 407 IPR004181 GO:0008270
Bva09g00220 866 MobiDBLite consensus disorder prediction 837 866 - -
Bva09g00220 866 PANTHER E3 SUMO-PROTEIN LIGASE SIZ1 9 806 - -
Bva09g00220 866 SUPERFAMILY FYVE/PHD zinc finger 107 169 IPR011011 -
Bva09g00220 866 SUPERFAMILY SAP domain 1 64 IPR036361 -
Bva09g00220 866 MobiDBLite consensus disorder prediction 791 817 - -
Bva09g00220 866 Pfam SAP domain 14 42 IPR003034 -
Bva09g00220 866 SMART sap_9 11 45 IPR003034 -
Bva09g00220 866 ProSiteProfiles SAP motif profile. 11 45 IPR003034 -
Bva09g00220 866 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 334 447 IPR013083 -
Bva09g00220 866 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 103 171 IPR013083 -
Bva09g00220 866 MobiDBLite consensus disorder prediction 515 555 - -
Bva09g00220 866 MobiDBLite consensus disorder prediction 797 817 - -
Bva09g00220 866 Gene3D SAP domain 1 64 IPR036361 -
Bva09g00220 866 PANTHER ZINC FINGER MIZ DOMAIN-CONTAINING PROTEIN 9 806 - -
Bva09g00220 866 MobiDBLite consensus disorder prediction 830 866 - -
Bva09g00220 866 ProSitePatterns Zinc finger PHD-type signature. 115 165 IPR019786 -
Bva09g00220 866 SMART PHD_3 114 166 IPR001965 -
Bva09g00220 866 ProSiteProfiles Zinc finger SP-RING-type profile. 346 429 IPR004181 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g00220 Bva-Chr9 1114374 1122410 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g00220 - - gmx:100793735 1372.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00220 09 1114374 1122410 Bva07g02430 07 19627456 19636264 BWGD
Bva09g00220 09 1114374 1122410 Bva09g00220 09 1114374 1122410 ECH