Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g02430 ATGGAGATTGGTTCTGGTTGGGTCTCGGTCAAAAAGAAACGCAAACAAACGAAGAACAGAGACGAGCGGAAAGTCGGTATCGATTACTGCTCGGGGCAGCATGCGGAGATGGATTTGGTAAACAGTTGTAAGGAAAAACTGACTTATTTTCGCATAAAAGAGCTCAAAGATGTGCTCACTCAACTAGGACTCTCGAAGCAGGGGAAAAAGCAGGATCTTGTTGATCGGATATTAGCGATTCTCTCAGATGACCAAGTTTCCAAAATGTGGGCTAAGAGGAATGCTGTTGCAAAAGAACAGGTGGCAAAACTTGTGGATGACACATATAGAAAAATGCAGAATTCTGGGGCTACTGATCTAGCTTCAAAGGGACAGGGAGTCTCAGACAGCagtaatataaaagttaaaggTGAAATTGAAGATTCTATTCAGTCAGACACAAAAATTCGCTGTCTCTGTGGAAGTTCATTGGAAACAGAGCACTTGATCAAGTGTGAGGATCCAAGATGTCATGTGTGGCAACACATTGGTTGTGTCATAATTCCAGATAAGCCTATGGAAGGGATCCCGCCTGTTcctgaattattttattgtgaaaTATGTCGACTCAGCCGAGCTGACCCTTTTTGGCTTTCGGTGCATCACCCTCTATATCCTGTGAAGTTGACCACAACCAGCATTCCAACTGATGGAACCAATCCAGTTCAGAGCATGGAGAAAACATTTCAACTTACTAGAGCATACAAGGACTTATTGTCAAAACAAGAGTATGATGTTCAGGCATGGTGTATGCTTCTGAACGATAAGGTTCCATTCAGGATGCAGTGGCCCCAATATACTGATCTACAGGTCAATGGTATGCCTGTTCGTGCAATTAACAGGCCTGGTTCACAATTGCTTGGGGCTAATGGTCGAGATGATGGTCCAATTATCACGCAGTATACAAAAGACGGAATTAACAAGATTTCCTTAACAGGATGTGATGCTCGCATTTTCTGTTTAGGAGTGCGCATTGTCAAAAGGCGCAGCATGCAACAGATCCTAAACATGATTCCTACGGAGTCTGACGGTGACCGTTTTGAAGATGCTCTAGCACGTGTCATCCGATGTGTTGGAGGTGGAAATGCAACAGATAATGCTGATAGTGATAGTGATAGTGATTTGGAAGTTGTTTCAGATACTTTTACCATCAACTTGCGTTGTCCGATGAGTGGATCCAGGATGAAGATTGCTGGAAGATTCAAACCTTGTGTTCACATGGGGTGTTTTGACCTTGAAGTTTTTGTGGAAATGAATCAACGTTCAAGGAAATGGCAATGTCCcatatgtttaaaaaactACGCATTAGAGAATATCATTATTGATCCATACTTTAATCGTGTCACATCCCTGATGAGAGCTTGTGGTGAAGATGTTACAGAGGTTGAGGTGAAGCCTGATGGTTCTTGGCGTGTCAAGGCTAAGAGTGAAAGTGAACGTTGGGATCTAGGGACTCTTTCACAGTGGCACTTGCCTGATGGTACTCTCTGTATTTCTACTGATGGAGAAAGTAAAAGAGTGGAAACACAGAAGCAGATCAAACAGGAAGGTATTTCAGACAGTCCTACTGGTTTAAAAATTGGCATCAGGAAGAATAGCAATGGGTTTTGGGAAGTCAGCAAACCTGAGGACACAAACACTTCATCAGGTAATAACATATCGAAAGAAAACATTGGAAATCCTCAACATGTGGTAATTCCAATGAGCAGCAGTGCCACTGAAAGTGGCCGGGATGGCGATGATCCTAGCGTAAATCAGGGTGGAGGTGGGCATATTGATTTCTCTCCTAACAATGGGATGGAGATGGATTCTATTTCTCTCAATGCTAATTCAGCATATGGGTTTACTGAGCATAACACTCCTGCTCCGATGGGGGGTACTGAAGTTATTGTTCTAAGTGATTCTGAAGAGGAAAACGAATTATTGATTTCTGCAACTTCCTACAAGAATAATGGAACAGATGCTGGAGGAGTTGCTTATTCTGTGCCCCCTTCAGGAATTGCTGATTCATATGTAGATGATCCCGCCCTTGGTGGAAATTCCTTTGGACTTTTTAATGCCAATGATGATGAATATGGGATGCCGCTGTGGTCATTGCATTCTGGAACTCAGGGAGGGCCAGGATTCCAATTATTCACTTCAGATGCAGATGTATCTGATGCATTGGTCCATTTGCAGCATGGTCCTATCAATTGCTCCTCATCTATGAATGGTTATGCATTGGCTCCAGATGCTACCTTGGAATCTAAAACTTTCATCCCAGACTCCTCTGCAAGTCGATCTGATCCTGATTTGAATGGTGGCTTAGTTGACAATCCATTGGCATTTGCTGGAGAGGATCCCTCGCTTCAGATTTTTCTCCCTACAAGACCCGCGGAATCGTCAATGCAGCATGAACTAAGAGATCAGGCGGATGTGTCCAATGGTGTCTGCAATGAGGATTGGATTTCTCTTAGACTTGGAGGTGCTGCTAGTGGAAGTAATGGTGAGCCTACAACCACAAATGGATTGAATTCTAGACAGCAAATTCCATCTGCAGACAATGCCACAGATACCTTGGCTGACACTGCTTCTTTGCTTCTTGGTATGAATGATGCTAGATCTGACAAGGCAAGTAGGCAAAGATCTGATAGTCCTTTCTCATTTCCCCGCCAAAAACGTTCAGTAAGGCCTCGCTTGTTTCTTTCCATTGATTCAGATTCGGAGTA 2747 0.4277 MEIGSGWVSVKKKRKQTKNRDERKVGIDYCSGQHAEMDLVNSCKEKLTYFRIKELKDVLTQLGLSKQGKKQDLVDRILAILSDDQVSKMWAKRNAVAKEQVAKLVDDTYRKMQNSGATDLASKGQGVSDSSNIKVKGEIEDSIQSDTKIRCLCGSSLETEHLIKCEDPRCHVWQHIGCVIIPDKPMEGIPPVPELFYCEICRLSRADPFWLSVHHPLYPVKLTTTSIPTDGTNPVQSMEKTFQLTRAYKDLLSKQEYDVQAWCMLLNDKVPFRMQWPQYTDLQVNGMPVRAINRPGSQLLGANGRDDGPIITQYTKDGINKISLTGCDARIFCLGVRIVKRRSMQQILNMIPTESDGDRFEDALARVIRCVGGGNATDNADSDSDSDLEVVSDTFTINLRCPMSGSRMKIAGRFKPCVHMGCFDLEVFVEMNQRSRKWQCPICLKNYALENIIIDPYFNRVTSLMRACGEDVTEVEVKPDGSWRVKAKSESERWDLGTLSQWHLPDGTLCISTDGESKRVETQKQIKQEGISDSPTGLKIGIRKNSNGFWEVSKPEDTNTSSGNNISKENIGNPQHVVIPMSSSATESGRDGDDPSVNQGGGGHIDFSPNNGMEMDSISLNANSAYGFTEHNTPAPMGGTEVIVLSDSEEENELLISATSYKNNGTDAGGVAYSVPPSGIADSYVDDPALGGNSFGLFNANDDEYGMPLWSLHSGTQGGPGFQLFTSDADVSDALVHLQHGPINCSSSMNGYALAPDATLESKTFIPDSSASRSDPDLNGGLVDNPLAFAGEDPSLQIFLPTRPAESSMQHELRDQADVSNGVCNEDWISLRLGGAASGSNGEPTTTNGLNSRQQIPSADNATDTLADTASLLLGMNDARSDKASRQRSDSPFSFPRQKRSVRPRLFLSIDSDSE 915
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g02430 915 Pfam MIZ/SP-RING zinc finger 397 445 IPR004181 GO:0008270
Bva07g02430 915 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 374 485 IPR013083 -
Bva07g02430 915 SUPERFAMILY SAP domain 37 100 IPR036361 -
Bva07g02430 915 ProSitePatterns Zinc finger PHD-type signature. 151 201 IPR019786 -
Bva07g02430 915 MobiDBLite consensus disorder prediction 839 857 - -
Bva07g02430 915 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 139 207 IPR013083 -
Bva07g02430 915 CDD PHD_Bye1p_SIZ1_like 150 201 - -
Bva07g02430 915 SMART sap_9 47 81 IPR003034 -
Bva07g02430 915 MobiDBLite consensus disorder prediction 549 612 - -
Bva07g02430 915 MobiDBLite consensus disorder prediction 551 593 - -
Bva07g02430 915 ProSiteProfiles Zinc finger SP-RING-type profile. 384 467 IPR004181 GO:0008270
Bva07g02430 915 PANTHER E3 SUMO-PROTEIN LIGASE SIZ1 45 859 - -
Bva07g02430 915 PANTHER ZINC FINGER MIZ DOMAIN-CONTAINING PROTEIN 45 859 - -
Bva07g02430 915 Pfam SAP domain 50 78 IPR003034 -
Bva07g02430 915 MobiDBLite consensus disorder prediction 1 21 - -
Bva07g02430 915 Gene3D SAP domain 37 100 IPR036361 -
Bva07g02430 915 SUPERFAMILY FYVE/PHD zinc finger 143 205 IPR011011 -
Bva07g02430 915 MobiDBLite consensus disorder prediction 835 857 - -
Bva07g02430 915 ProSiteProfiles SAP motif profile. 47 81 IPR003034 -
Bva07g02430 915 SMART PHD_3 150 202 IPR001965 -
Bva07g02430 915 MobiDBLite consensus disorder prediction 877 898 - -
Bva07g02430 915 CDD SP-RING_Siz_plant 398 446 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g02430 Bva-Chr7 19627456 19636264 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g02430 - - gmx:100793735 1380.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00220 09 1114374 1122410 Bva07g02430 07 19627456 19636264 BWGD
Bva07g02430 07 19627456 19636264 Bva07g02430 07 19627456 19636264 ECH