Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g00176 ATGGCTTCAGTAGCTGTGCAGCCACAAACTGCGCAATCGAACAACCCTagtaagaaaatgacaaagcaATTGACAGGCAAGCGGGATGATACTCCTTTGCACTCTGCGGCAAGAGCAGGAAATCTCGCTGCCTTGAGGGAGATCCTTGCAAATACTGAAGACGAGAAATTGAAGGAATTATTGGCGAGGCAAAATCAAGCTGGAGAAACAGCGCTTTATGTTGCTGCTGAATATGGTTATACTGAATTAGTGAGGGAGATGATTCAATATTATGATCTTGCTGATGCTGGAATAAAAGCAAGAAATGGCTTTGATGCATTTCATATAGCCGCCAAACAAGGGGACATAGATGTATTGCAGATCCTTATGCAGGTTCATCCTGAATTATCAATGACTGTGGATCCATCAAACACCACAGCTCTGCACACAGCTGCAACTCAGGGGCATACTGAGGTAGTGAATTTACTGTTGGAAGCAGGAAGTAGCTTGGCCACCATTGCTAGAAGCAACGGGAAAACACCCTTGCATTCTGCTGCTAGAAATGGACATTTGGAGGTTGTGAAAGCACTGCTGCACAAGGAGCCTGGGGTTGCAACCAGGACTGATAAGAAGGGACAGACCGCACTTCACATGGCAGTGAAAGGACAGAATCTTGAGGTGGTCGAGGAATTAATGAAAGCAGATCCCCTATCAATAAACATGACTGATACTAAGGGAAATACAGCATTGCATATAGCTACCAGGAAGGGCAGGACTCAGATTGTTAGCTTGATTCTTGGACAGAGGGAAACAGATACAAAGGCCATTAACAGAACTGGGGAGACTGCACTTGACACTGCTGAGAAAACTCGGAACTCAGGTATTGCAGCCATTCTGCTGGAACACGGTGTTCAGAGTGCCAAAGCCATAAAGCCCCAGGCCACAACAAACACAGCCCGTGAGTTGAAACAAACAGTCAGTGACATAAAGCATGAAGTTCATTACCAACTAGAACACACACATCAAACCAGAAAACGTGTTCAAGGCATTGCCAAACGTCTCAACAAAATGCACGCAGAAGGACTCAACAATGCAATCAACTCCACAACTGTGGTGGCAGTCCTAATTGCCACTGTAGCCTTTGCTGCTATTTTCACCGTCCCTGGTCAATATGTTGATGACCCACAAAATATTCCTCCAGGACATTCCCTTGGGGAAGCAAATATAGCTCCCCAAGTTCCATTCATAATTTTCATCGTCTTTGATTCCATCGCACTCTTCATATCTCTAGCGGTTGTGATAGTTCAGACCTCAGTTGTGGTTATAGAGAGCAAAGCAAAGAAGCAGATGATGGCCATTATTAACAAGCTAATGTGGTTAGCTTGTGTACTTGTCTCTGTGGCCTTCTTGGCATTGTCATTTGTAGTGGTGGGAGAGCACGAAAGATGGTTAGCTATTGGGGTGACTATCATAGGGACGACAATAATGGCTACAACTTTGGGGACCATGTGTTATTGGGTCATTAGGCATCGCATCGAGGCCTCAAATATGAGGAGCCTTCGGAGATCTTCATTGGGAAGCAGGTCAAggtctttttcaatttcagttATGTCAGATTCTGAGCTACTAAATAATGAGTTTAAGAAAATGTATGCGATTTA 1640 0.4372 MASVAVQPQTAQSNNPSKKMTKQLTGKRDDTPLHSAARAGNLAALREILANTEDEKLKELLARQNQAGETALYVAAEYGYTELVREMIQYYDLADAGIKARNGFDAFHIAAKQGDIDVLQILMQVHPELSMTVDPSNTTALHTAATQGHTEVVNLLLEAGSSLATIARSNGKTPLHSAARNGHLEVVKALLHKEPGVATRTDKKGQTALHMAVKGQNLEVVEELMKADPLSINMTDTKGNTALHIATRKGRTQIVSLILGQRETDTKAINRTGETALDTAEKTRNSGIAAILLEHGVQSAKAIKPQATTNTARELKQTVSDIKHEVHYQLEHTHQTRKRVQGIAKRLNKMHAEGLNNAINSTTVVAVLIATVAFAAIFTVPGQYVDDPQNIPPGHSLGEANIAPQVPFIIFIVFDSIALFISLAVVIVQTSVVVIESKAKKQMMAIINKLMWLACVLVSVAFLALSFVVVGEHERWLAIGVTIIGTTIMATTLGTMCYWVIRHRIEASNMRSLRRSSLGSRSRSFSISVMSDSELLNNEFKKMYAI 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g00176 546 ProSiteProfiles Ankyrin repeat region circular profile. 238 259 - -
Bva09g00176 546 Pfam Ankyrin repeat 239 260 IPR002110 GO:0005515
Bva09g00176 546 PANTHER PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT 8 546 - -
Bva09g00176 546 Gene3D - 167 346 IPR036770 -
Bva09g00176 546 ProSiteProfiles Ankyrin repeat region circular profile. 170 191 - -
Bva09g00176 546 ProSiteProfiles Ankyrin repeat profile. 170 202 IPR002110 GO:0005515
Bva09g00176 546 Pfam Ankyrin repeats (3 copies) 170 236 IPR002110 GO:0005515
Bva09g00176 546 Pfam Ankyrin repeats (3 copies) 97 163 IPR002110 GO:0005515
Bva09g00176 546 Pfam Ankyrin repeats (3 copies) 17 90 IPR002110 GO:0005515
Bva09g00176 546 SMART ANK_2a 272 302 IPR002110 GO:0005515
Bva09g00176 546 SMART ANK_2a 170 199 IPR002110 GO:0005515
Bva09g00176 546 SMART ANK_2a 204 234 IPR002110 GO:0005515
Bva09g00176 546 SMART ANK_2a 28 57 IPR002110 GO:0005515
Bva09g00176 546 SMART ANK_2a 136 165 IPR002110 GO:0005515
Bva09g00176 546 SMART ANK_2a 67 96 IPR002110 GO:0005515
Bva09g00176 546 SMART ANK_2a 238 268 IPR002110 GO:0005515
Bva09g00176 546 SMART ANK_2a 102 131 IPR002110 GO:0005515
Bva09g00176 546 MobiDBLite consensus disorder prediction 1 33 - -
Bva09g00176 546 ProSiteProfiles Ankyrin repeat region circular profile. 204 226 - -
Bva09g00176 546 Pfam Domain of unknown function 353 469 IPR026961 -
Bva09g00176 546 ProSiteProfiles Ankyrin repeat region circular profile. 136 163 - -
Bva09g00176 546 ProSiteProfiles Ankyrin repeat profile. 136 168 IPR002110 GO:0005515
Bva09g00176 546 ProSiteProfiles Ankyrin repeat profile. 204 226 IPR002110 GO:0005515
Bva09g00176 546 Gene3D - 3 166 IPR036770 -
Bva09g00176 546 SUPERFAMILY Ankyrin repeat 32 297 IPR036770 -
Bva09g00176 546 MobiDBLite consensus disorder prediction 1 21 - -
Bva09g00176 546 ProSiteProfiles Ankyrin repeat profile. 102 134 IPR002110 GO:0005515
Bva09g00176 546 ProSiteProfiles Ankyrin repeat region circular profile. 102 124 - -
Bva09g00176 546 PANTHER ANKYRIN REPEAT PLANT PROTEIN 8 546 - -
Bva09g00176 546 ProSiteProfiles Ankyrin repeat profile. 238 259 IPR002110 GO:0005515
Bva09g00176 546 PRINTS Ankyrin repeat signature 288 302 IPR002110 GO:0005515
Bva09g00176 546 PRINTS Ankyrin repeat signature 171 186 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g00176 Bva-Chr9 841167 844036 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g00176 11 546 Miscellaneous Gene Families AT1G07710 75.000 0.0 775
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g00176 - - mnt:21394146 848.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00176 09 841167 844036 Bva09g00176 09 841167 844036 ECH
Bva09g00176 09 841167 844036 Bva07g02467 07 19861393 19865719 ECH