Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g02467 ATGGCTTCAGTAGCTGTGCAGCCACAAGCAGTGCAATCGAGTACCCCTAGGAAAAAGATGACAAAGCAATTAACAGGAAAGCGGGATGATACTCCCTTGCACTCAGCGGCAAGAGCAGGAAATCTCGCTTCCCTGAAGGAGATCCTTACAAATACTGAAGAGGAGCAATTGAAGGCATTATTGGCAAAGCAAAATCAAGCCGGAGAAACAGCGCTTTATGTTACCACTGAATATGGTTATAATGAAGTAGTTAGGGAGATGATTCAATATTATGATCTTGCTGATGCAGGAATCAAAGCAAGAAATGGCCTTGATGCATTCCACATAGCTGCCAAACAAGGGGACATAgATGTGTTGCAGATCCTTATGGAGGTTCATCCTGAATTATCAATGACTGTGGATCTATCAAACACCACAGCTCTGCACACAGCTGCAACACAGGGGCATACTGAGGTAGTGAATTTCCTATTGGAAGCAGGAAGTAGCTTGGCCACCATTGCTAGAAGCAACGGGAAAACACCCTTGCATTCTGCTGCTAGAAATGGACATTTGGAGGTTGTGAAAGCACTGCTGCAGAGAGAGCCTGGGGTTGCCACGAGGACTGATAAGAAGGGTCAGACCCCACTTCACATGGCAGTGAAGGGACATAATCTTGAGGTGGTCGGGGAATTAATCAAAGTAGGTCCTCTATCAATAAACATCACAGATAATAAGGGAAATACAGCATTGCATATAGCTACCAGGAAGGGTAGAACTCAGATTGTTAGATTGCTTCTTGAACGGAGGGAAACAGATACAAAGGCCATCAACAGAACTGGGGAGACTGCACTTGACACTGCTGAGAAAACTGGAAACTCCAATCTTGTAGCCATTCTACAAGAACACGGTGTTCAGAGTGCGAAAACCATAAAGCCTCAGGCCACAACAAGCACAGCCCGTGAGTTGAAACAAACAGTCAGTGACATAAAGCATGAAGTCCATTACCAGCTAGAACACACACGTCAAACCAGAAAACGTGTTCAAGGCATTGCCAAACGTCTCAATAAAATGCACGCAGAAGGGCTGAACAATGCAATCAACTCCACAACAGTGGTGGCAGTCCTGATTGCCACAGTTGCCTTTGCTGCTATTTTCACAGTCCCTGGTCAATACGTTGATGACCCAGAAAACATTCCTCCAGGACATTCCATTGGTGAAGCAAATATAGCCCCTCAAGttccatttataattttctttgtgtttGATTCCATTGCTCTCTTCATTTCTCTGGCGGTTGTGGTGGTTCAAACCTCAGTTGTGGTTATAGAGAGCAAAGCAAAGAAGCAGATGATGGCCGTTATTAACAAGCTAATGTGGTTGGCCTGTGTACTTATTTCGGTGGCCTTCTTGGCATTGTCATTTGTAGTGGTGGGACAGCATGAGAAATGGTTAGCAATTGGAGTGACTATCATAGGGACAACTATAATGGCTACAACTTTGGGAACCATGTGTTACTGGGTCATTAGGCATCGCATTGAGTCCTCAAATATGAAGAGCATTCGGAGATCTTCCTTGGGAAGCAGGTCAAGGTCTTTTTCAATGTCGGTTATGTCAGATTCTGAGCTATTAAACAATGAGTTTAAGAAAATTTCCATATTTTCGTGGAACACTGAAAAGCATTTTCTGGCGCCGAAACGCCAAATTGGTCTGAAAGATCGGAAAAGCAATCTCTCGCCGTGTTTGTGTAAACTGCACGATATCCAAATTATCGATTTCGAGCTCCTTCACACTTCCTCTGGAATAGAATACATCACTCCGGAGCAAGTGAGGAATGAAATGGTTGGTGAGGTTAAAAAGCTAGCTCGTATTTCTCTGATTGACCTCGCTGACGCTACTGGAGTTGACCTGTATCATGTTGAGAAGTA 1904 0.438 MASVAVQPQAVQSSTPRKKMTKQLTGKRDDTPLHSAARAGNLASLKEILTNTEEEQLKALLAKQNQAGETALYVTTEYGYNEVVREMIQYYDLADAGIKARNGLDAFHIAAKQGDIDVLQILMEVHPELSMTVDLSNTTALHTAATQGHTEVVNFLLEAGSSLATIARSNGKTPLHSAARNGHLEVVKALLQREPGVATRTDKKGQTPLHMAVKGHNLEVVGELIKVGPLSINITDNKGNTALHIATRKGRTQIVRLLLERRETDTKAINRTGETALDTAEKTGNSNLVAILQEHGVQSAKTIKPQATTSTARELKQTVSDIKHEVHYQLEHTRQTRKRVQGIAKRLNKMHAEGLNNAINSTTVVAVLIATVAFAAIFTVPGQYVDDPENIPPGHSIGEANIAPQVPFIIFFVFDSIALFISLAVVVVQTSVVVIESKAKKQMMAVINKLMWLACVLISVAFLALSFVVVGQHEKWLAIGVTIIGTTIMATTLGTMCYWVIRHRIESSNMKSIRRSSLGSRSRSFSMSVMSDSELLNNEFKKISIFSWNTEKHFLAPKRQIGLKDRKSNLSPCLCKLHDIQIIDFELLHTSSGIEYITPEQVRNEMVGEVKKLARISLIDLADATGVDLYHVEK 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g02467 634 Pfam Ankyrin repeat 239 260 IPR002110 GO:0005515
Bva07g02467 634 ProSiteProfiles Ankyrin repeat profile. 136 168 IPR002110 GO:0005515
Bva07g02467 634 SUPERFAMILY Ankyrin repeat 32 297 IPR036770 -
Bva07g02467 634 MobiDBLite consensus disorder prediction 1 20 - -
Bva07g02467 634 Pfam E3 UFM1-protein ligase 1 576 634 IPR018611 GO:0061666|GO:0071569
Bva07g02467 634 Gene3D - 167 344 IPR036770 -
Bva07g02467 634 PANTHER ANKYRIN REPEAT PLANT PROTEIN 10 543 - -
Bva07g02467 634 ProSiteProfiles Ankyrin repeat region circular profile. 204 228 - -
Bva07g02467 634 ProSiteProfiles Ankyrin repeat profile. 238 261 IPR002110 GO:0005515
Bva07g02467 634 ProSiteProfiles Ankyrin repeat region circular profile. 136 163 - -
Bva07g02467 634 ProSiteProfiles Ankyrin repeat region circular profile. 170 193 - -
Bva07g02467 634 ProSiteProfiles Ankyrin repeat profile. 170 202 IPR002110 GO:0005515
Bva07g02467 634 Pfam Ankyrin repeats (3 copies) 95 163 IPR002110 GO:0005515
Bva07g02467 634 Pfam Ankyrin repeats (3 copies) 170 236 IPR002110 GO:0005515
Bva07g02467 634 ProSiteProfiles Ankyrin repeat region circular profile. 238 261 - -
Bva07g02467 634 Pfam Domain of unknown function 353 469 IPR026961 -
Bva07g02467 634 PANTHER PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT 10 543 - -
Bva07g02467 634 SMART ANK_2a 272 301 IPR002110 GO:0005515
Bva07g02467 634 SMART ANK_2a 136 165 IPR002110 GO:0005515
Bva07g02467 634 SMART ANK_2a 170 199 IPR002110 GO:0005515
Bva07g02467 634 SMART ANK_2a 204 234 IPR002110 GO:0005515
Bva07g02467 634 SMART ANK_2a 238 268 IPR002110 GO:0005515
Bva07g02467 634 SMART ANK_2a 102 131 IPR002110 GO:0005515
Bva07g02467 634 SMART ANK_2a 28 58 IPR002110 GO:0005515
Bva07g02467 634 SMART ANK_2a 67 96 IPR002110 GO:0005515
Bva07g02467 634 ProSiteProfiles Ankyrin repeat region circular profile. 102 124 - -
Bva07g02467 634 Gene3D - 4 166 IPR036770 -
Bva07g02467 634 ProSiteProfiles Ankyrin repeat profile. 102 134 IPR002110 GO:0005515
Bva07g02467 634 ProSiteProfiles Ankyrin repeat profile. 204 228 IPR002110 GO:0005515
Bva07g02467 634 MobiDBLite consensus disorder prediction 1 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g02467 Bva-Chr7 19861393 19865719 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g02467 13 543 Miscellaneous Gene Families AT1G07710 75.706 0.0 768
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g02467 - - mnt:21394146 835.484
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva07g02467 07 19861393 19865719 Bva07g02467 07 19861393 19865719 ECH
Bva09g00176 09 841167 844036 Bva07g02467 07 19861393 19865719 ECH