Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g02350 ATGCTTTGCAGGAAGAGTTCCCGGAACGTCGGTTCAGGATCGGTGCCGGTGTACCTCAATGTGTACGATCTGACACCCATGAACGGCTATACTTACTGGTTCGGCCTCGGAGTGTACCATTCCGGTGTTCAAGTTCACGGAGTTGAGTACGCATTCGGGGCTCACGAGTATCCGACGACGGGGATTTTCGAGGGGGAACCGAAACGGTGTGATGGGTTCAGATTTAGGAAGACAATTCTGATTGGGAAGACGGACATGGGAGCTGAAGAGGTAAGGGGTGTGATGGGGGAACTTGCAGGGGAGTACAGAGGAAATGCTTATAATTTGATTACCAAGAACTGCAACCATTTTTGTAATGATGCTTGTGTTCGACTCACCGGAAATCCTATCCCAAAATGGGTGAATCGCCTTGCTCGAATCGGGTTTCTGTGCAATTGTGTTCTTCCTGTGActttaaattcaacaaaagtTAGGCATCACAGACTGGAAGAAAAGGCATGTGAAGCAGAGAAGCAAGCAGTAACAAATGATTCCAATAAGCAGATTACAGCTTCAAACGCTTCGCCAtggtcttcttcttctggACTGCGAAGGGGAAGGAGTAGAACCAGACGTGCCCTTCCTCCATCTTCGCCTTTGATTCGCACTTGTTCAACTTG 659 0.4628 MLCRKSSRNVGSGSVPVYLNVYDLTPMNGYTYWFGLGVYHSGVQVHGVEYAFGAHEYPTTGIFEGEPKRCDGFRFRKTILIGKTDMGAEEVRGVMGELAGEYRGNAYNLITKNCNHFCNDACVRLTGNPIPKWVNRLARIGFLCNCVLPVTLNSTKVRHHRLEEKACEAEKQAVTNDSNKQITASNASPWSSSSGLRRGRSRTRRALPPSSPLIRTCST 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g02350 219 SMART DUF862_2a 15 153 IPR008580 GO:0008233
Bva08g02350 219 ProSiteProfiles PPPDE domain profile. 15 152 IPR008580 GO:0008233
Bva08g02350 219 Pfam PPPDE putative peptidase domain 16 149 IPR008580 GO:0008233
Bva08g02350 219 Gene3D PPPDE domains 11 171 IPR042266 -
Bva08g02350 219 PANTHER F23A5.4 PROTEIN 3 217 - -
Bva08g02350 219 PANTHER DESUMOYLATING ISOPEPTIDASE 3 217 IPR008580 GO:0008233
Bva08g02350 219 MobiDBLite consensus disorder prediction 174 219 - -
Bva08g02350 219 MobiDBLite consensus disorder prediction 174 197 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g02350 Bva-Chr8 15189713 15191304 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g02350 K22763 - jre:108984594 359.762
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g02350 08 15189713 15191304 Bva02g02563 02 24071806 24073620 ECH
Bva08g02350 08 15189713 15191304 Bva08g02350 08 15189713 15191304 ECH