Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g02563 ATGCTTTGCAGGAAGAGTTCCCGGAACGGCGGTTCGGGATCGGTGCCGGTGTACCTCAATGTGTACGATCTGACGCCCATAAACGGTTACGCCTACTGGTTCGGCCTCGGAGTGTACCATTCCGGTGTTGAAGTTCACGGAGTCGAGTACGCGTTCGGGGCTCACGAATATCCGACGGCGGGGATTTTCGAAGGGGAACCGAAACGGTGTGATGGGTTCGCGTTTAGGAAGACGATATTGATTGGGAAGACTGATATGGGAGCTGAAGAAGTAAGGAGGGTGATGGAGGAGCTTGCGGGGGAATACAGAGGAAATGCTTATAATTTGATTACCAAGAATTGCAACCATTTTTGCAATGACGCTTGTGTTCGACTCACCGGAAATCCTATTCCAAAATGGGTGAATCGCCTTGCCAGAATCGGGTTTTTGTGCAATTGTGTTCTTCCGGTGActttaaattcaacaaaagtTAGGCATCACAGATTGGAAGACAAGGCATGTGAAGGAGAGAAGCAAGCATTAACATGTGATTCTTCTAATAAGCAGCTTACAGCTTCAAACACAACGTCATCGTCATCGTCATCTTCACCCTCTGCTTCTTGCTCTGGACTGCGCAGGGGAAGGAGTAGAACCAGACGTGCCCTTCCCCCGTCTTCACCTTTGATTCGCTCTTCTTCAACTTG 683 0.4832 MLCRKSSRNGGSGSVPVYLNVYDLTPINGYAYWFGLGVYHSGVEVHGVEYAFGAHEYPTAGIFEGEPKRCDGFAFRKTILIGKTDMGAEEVRRVMEELAGEYRGNAYNLITKNCNHFCNDACVRLTGNPIPKWVNRLARIGFLCNCVLPVTLNSTKVRHHRLEDKACEGEKQALTCDSSNKQLTASNTTSSSSSSSPSASCSGLRRGRSRTRRALPPSSPLIRSSST 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g02563 227 MobiDBLite consensus disorder prediction 178 227 - -
Bva02g02563 227 MobiDBLite consensus disorder prediction 178 205 - -
Bva02g02563 227 Gene3D PPPDE domains 12 166 IPR042266 -
Bva02g02563 227 PANTHER F23A5.4 PROTEIN 4 226 - -
Bva02g02563 227 PANTHER DESUMOYLATING ISOPEPTIDASE 4 226 IPR008580 GO:0008233
Bva02g02563 227 ProSiteProfiles PPPDE domain profile. 15 152 IPR008580 GO:0008233
Bva02g02563 227 SMART DUF862_2a 15 153 IPR008580 GO:0008233
Bva02g02563 227 Pfam PPPDE putative peptidase domain 16 149 IPR008580 GO:0008233
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g02563 Bva-Chr2 24071806 24073620 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g02563 K22763 - jre:108984594 338.961
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g02350 08 15189713 15191304 Bva02g02563 02 24071806 24073620 ECH
Bva02g02563 02 24071806 24073620 Bva02g02563 02 24071806 24073620 ECH