Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bva08g02285 | ATGTGGCGGAGATTCGTCTCTTCTCATCTCAAATCCCTAGCTGCAGTCGCTGCTTCTTCTCGTCCACGATCTGCTTCCACAGCTACGCGATTCACCAATTCAGCTCAACCGTTTGTTTCGCGCTCAGCATTTTCCCTCACCCACCACTTCAGCACCGAGTCCGGTGATAGTGCGCTTAAGAAGAAGGTTGAGGATGTTATCCCCATTGCTACTGGGCATGAGCGTGAGGAGATTGAAGCTGAGCTTGAGGGAAGGGAGATTCTTGATATAAACTATCCCGTCGGTCCTTTTGGCACAAAGGAAGAACCATCTGTCATTAAGTCCTACTATGACAAAAGGATAGTGGGATGCCCCGGAGGGGAAGGCGAGGATGAGCATGACGTTGTCTGGTTTTGGCTGGAGAAAGGGAAACCTCATGAATGTCCAGTGTGTTCACAGTATTTTGTGCTTGAGGTGGTGGGACCTGGTGGATCCCCAGATGGACACGGGGATGACGACGAGCATCATTA | 509 | 0.5069 | MWRRFVSSHLKSLAAVAASSRPRSASTATRFTNSAQPFVSRSAFSLTHHFSTESGDSALKKKVEDVIPIATGHEREEIEAELEGREILDINYPVGPFGTKEEPSVIKSYYDKRIVGCPGGEGEDEHDVVWFWLEKGKPHECPVCSQYFVLEVVGPGGSPDGHGDDDEHH | 169 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bva08g02285 | 169 | SUPERFAMILY | Rubredoxin-like | 58 | 156 | - | - | |
| Bva08g02285 | 169 | Pfam | Cytochrome c oxidase subunit Vb | 61 | 157 | IPR002124 | GO:0005740|GO:0005751|GO:0006123 | |
| Bva08g02285 | 169 | PANTHER | CYTOCHROME C OXIDASE SUBUNIT 5B, MITOCHONDRIAL | 1 | 169 | IPR002124 | GO:0005740|GO:0005751|GO:0006123 | |
| Bva08g02285 | 169 | CDD | Cyt_c_Oxidase_Vb | 58 | 155 | IPR002124 | GO:0005740|GO:0005751|GO:0006123 | |
| Bva08g02285 | 169 | ProSiteProfiles | Cytochrome c oxidase subunit Vb, zinc binding domain profile. | 58 | 157 | IPR002124 | GO:0005740|GO:0005751|GO:0006123 | |
| Bva08g02285 | 169 | PANTHER | - | 1 | 169 | - | - | |
| Bva08g02285 | 169 | Gene3D | Cytochrome c oxidase, subunit Vb | 59 | 153 | IPR036972 | GO:0005740|GO:0005751|GO:0006123 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Bva08g02285 | Bva-Chr8 | 14860441 | 14863331 | Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bva08g02285 | K02265 | - | qsu:112027092 | 214.927 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Bva08g02285 | 08 | 14860441 | 14863331 | Bva02g02473 | 02 | 23667894 | 23670794 | BWGD | |
| Bva08g02285 | 08 | 14860441 | 14863331 | Bva02g02473 | 02 | 23667894 | 23670794 | ECH | |
| Bva08g02285 | 08 | 14860441 | 14863331 | Bva08g02285 | 08 | 14860441 | 14863331 | ECH |