LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bva02g02473	ATGTGGCGGAGATTCGTCGCTTCTCATCTCAAATCCCTAGCAACGGTCGCTGCTTCTCCTTCCCGATCTGTTTCCACAGCTTCGCGATTCGCCAATTCTACTCCGCCGTTTGTTTATCGCTCAGAATCTTCGCTTACCCGCTACTTCGGCACCGAGTCCGGTAGTACTGCGCTCAAGAAGAAGGTTGAGGATGTTATGCCCATTGCTACCGGGCATGAGCGTGAGGAGCTTGAGGCTGAGCTCGAGGGAAGGAATGTGCTTGATATAAACTATCCCGTCGGTCCCTTTGGCACAAAGGAAGAACCAGCTGTTATTAAGTCTTACTATGACAAAAGGATAGTGGGATGCCCGGGAGGTGAAGGTGAGGATGAGCATGATGTTGTCTGGTTTTGGCTGGAGAAAGGGAAGCCTCATGAATGTCCAGTGTGTTCACAGTATTTTGTGCTTGAAGTGGTGGGACCTGGTGGACCACCTGATGGACATGATGACGATCATCATTA	500	0.504	MWRRFVASHLKSLATVAASPSRSVSTASRFANSTPPFVYRSESSLTRYFGTESGSTALKKKVEDVMPIATGHEREELEAELEGRNVLDINYPVGPFGTKEEPAVIKSYYDKRIVGCPGGEGEDEHDVVWFWLEKGKPHECPVCSQYFVLEVVGPGGPPDGHDDDHH	166

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bva02g02473	166	CDD	Cyt_c_Oxidase_Vb	57	154	IPR002124	GO:0005740\|GO:0005751\|GO:0006123
	Bva02g02473	166	PANTHER	-	1	166	-	-
	Bva02g02473	166	Pfam	Cytochrome c oxidase subunit Vb	66	155	IPR002124	GO:0005740\|GO:0005751\|GO:0006123
	Bva02g02473	166	ProSiteProfiles	Cytochrome c oxidase subunit Vb, zinc binding domain profile.	57	156	IPR002124	GO:0005740\|GO:0005751\|GO:0006123
	Bva02g02473	166	Gene3D	Cytochrome c oxidase, subunit Vb	58	152	IPR036972	GO:0005740\|GO:0005751\|GO:0006123
	Bva02g02473	166	PANTHER	CYTOCHROME C OXIDASE SUBUNIT 5B, MITOCHONDRIAL	1	166	IPR002124	GO:0005740\|GO:0005751\|GO:0006123
	Bva02g02473	166	SUPERFAMILY	Rubredoxin-like	57	155	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bva02g02473	Bva-Chr2	23667894	23670794	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Bva02g02473	K02265		-	egr:104449471	223.402

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Bva08g02285	08	14860441	14863331	Bva02g02473	02	23667894	23670794	BWGD
	Bva08g02285	08	14860441	14863331	Bva02g02473	02	23667894	23670794	ECH
	Bva02g02473	02	23667894	23670794	Bva02g02473	02	23667894	23670794	ECH