Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g02264 ATGGGTGCTTCTCTGCCCCCCAAAGAGGCCAACCTCTTCAAGCTCATTGTTAAATCATATGAAaccaaacaatacaaaaagGGGCTGAAAGCAGCCGATGccatattgaaaaaatttccAGACCATGGAGAGACTTTATCAATGAAGGGTTTAACATTAAATTGCATGGATCGTAAGTCTGAAGCATATGAACTTGTTCGTCAAGGACTAAAGAATGACCTCAAAAGTCATGTTTGCTGGCATGTCTATGGTCTCCTTTATCGTTCAGACAGAGAATATAGGGAAGCAATTAAGTGCTACCGGAATGCTCTGAAAATAGATCCTgacaatattgaaattttacgTGACCTATCACTCTTACAGGCTCAAATGCGAGATCTAACTGGGTTTGTTGAGACAAGGCAACAACTTTTGACTCTCAAGCCTAATCATCGCATGAACTGGATTGGCTTTGCTGTTTCCCATCATTTAAACTCTAATGCGTCCAAGGCAGTTGAAATTCTGGAAGCATATGAAGGGACATTAGAAGATGATTACCCTCCAGACAATGAGCGGTGTGAGCATGGGGAAATGCTTTTATATAAGATTTCAATGCTAGAAGAATGTGGGAATCTTGAGAGAGCTCTTGAAGAGTTGcacaaaaaagaatcaaaaattGTTGATAAACTTTCGTATAAAGAACTTGAGGTTTCACTTTTAGTGAAGCTTGAGCACTTAGAAGAAGGTGAAAAATTGTATCGGGCATTACTTTCCATGAATCCAGACAATTATAGATACTATGAAGGCCTCCAAAAATGTGTTGGTTTATATtctgaaaatggaaattattCTCCTGATGAAATTAATCAGTTAGATGCCTTGTACAAATCGCTTGTGCAGCAATATAAGTGGTCTTCTGCTGTTAAGAGAATACCTCTTGATTTTCTACAAGGTGACAAATTTCGAGAAGCAGCGGATAATTATATTAGGCCTCTCTTAATTAAGgGAGTTCCATCCTTGTTCTCagatctttcttctttgtacaATCACCCTGGGAAGGCGGACATTTTGGAACAGCTCATTCTTGAGTTAGAGCATTCAATCAGGACAATAGGTCAATTTCCTGGGAGTGTGGGAAAAGATCCTCCCTCAACTCTGATGTggactttgtttttattggcTCAGCATTATGATAGGCGGGGCCAGTATGAAATTGCGCTTTCTAAAATTGACGAGGCTATAGAACATACACCAACTGTCATCGATTTGTATTCAGCCAAgAGTCGTATACTGAAGCATGCTGGTGATTTGGTGGCTGCTGCTGCATTTGCAGACGAAGCTCGGTGTATGGATCTTGCTGATCGTTATGTTAATAGTGACTGTGTTAAGCGAATGCTTCAGGCTGATCAGGTGGCTTTGGCCGAAAAAACTGCTGTATTGTTCACAAAAGATGGGGATCAACACAACAACCTCCATGATATGCAGTGCATGTGGTATGAACTTGCCTCTGGTGAAAGCTACTTCCGCCAAGGTGATCTTGGTCGGGCTCTCAAGAAATTTTTAGCAGTGGAGAAGCATTATGCTGATATTACTGAAGATCAATTTGATTTCCATTCATACTGCCTAAGGAAAATGACCTTGCGTACTTATGTGGAAATGCTTAAGTTTCAAGACCGATTACACTCGCatgtatattttcataaagCAGCAGCTGGAGCTATCAGATGCTACATAAAATTGTATGATTCTCCTCCAAAGTCTACAGTTGAGGAAGATGACGAGATGTCGAAGTTGCTTCCTtctcagaaaaggaaaatgaggcaaaagcaaagaaaggcAGAAGCACGAGCTAAGAAAGAGGCAGAAGAAAAGAACGAAGAGTCAAGTGCTAGTGGTGCATCCAAGTCTGGAAAACGACATGTAAAACCTGTTGATCCAGATCCACGTGGGGAGAAGCTGTTGCAGATTGAATATCCATTGTTGGAAGCGACAAAATACTTGAAGTTACTGCAGAAGAACTCACCTGATTCATTGGAGACACACTTGCTCTCTTTTGAATTAAACATGAGAAAGCAAAAGGTTTTGCTTGCTTTTCAGGCTGTAAAGCAGCTACTGAGGTTGGATGCTGAACACCCTGATTCTCACCGTTGCTTGATTAAATTCTTCCATAAAGTGGGATCCATGAACGCTCCAGTCACTGACAGTGAGAAACTCATTTGGAGTGTGTTAGAAGCTGAGCGCCCAACCATTAGTGAGTTGCATGAGAAATCTCTGTCTGAGACAAACAACTCTTTCCTTGAAAAACATAAAGAGTCTTTGATGCATAGGGCTGCCTTTGCTGAAATATTGTACATTTTGGACACCAATAAAAGGTCTGAAGCCGTTAAGTTGATTGAAGAGTCAACAAATGACCTTGCACCAACAAATGGAGCTCTGGGACCAGTCAGGCAATGGAAGCTTAAAGACTGTATTGCTGTTCATAAGCTTCTTGTAACTGTCCTTGTTGACCAGGATGCTGCCTTAAGATGGAAAGCACATTGTGCAGAATATTTCCCTTATTCTACATACTTCGAGGGGAAACGCAGCTCTGCTTTTTCTAACTCGTTCTTAAATCAGATATGTAAGAACTCTGAAAGTGGGAGTCCTATCCTTTTCGTGGGTGATCAAAATGTCGATTCTGTCACATCGAATGGGAAATTAGAGCCATTTAAAGATCTCGCTATCTG 2705 0.3867 MGASLPPKEANLFKLIVKSYETKQYKKGLKAADAILKKFPDHGETLSMKGLTLNCMDRKSEAYELVRQGLKNDLKSHVCWHVYGLLYRSDREYREAIKCYRNALKIDPDNIEILRDLSLLQAQMRDLTGFVETRQQLLTLKPNHRMNWIGFAVSHHLNSNASKAVEILEAYEGTLEDDYPPDNERCEHGEMLLYKISMLEECGNLERALEELHKKESKIVDKLSYKELEVSLLVKLEHLEEGEKLYRALLSMNPDNYRYYEGLQKCVGLYSENGNYSPDEINQLDALYKSLVQQYKWSSAVKRIPLDFLQGDKFREAADNYIRPLLIKGVPSLFSDLSSLYNHPGKADILEQLILELEHSIRTIGQFPGSVGKDPPSTLMWTLFLLAQHYDRRGQYEIALSKIDEAIEHTPTVIDLYSAKSRILKHAGDLVAAAAFADEARCMDLADRYVNSDCVKRMLQADQVALAEKTAVLFTKDGDQHNNLHDMQCMWYELASGESYFRQGDLGRALKKFLAVEKHYADITEDQFDFHSYCLRKMTLRTYVEMLKFQDRLHSHVYFHKAAAGAIRCYIKLYDSPPKSTVEEDDEMSKLLPSQKRKMRQKQRKAEARAKKEAEEKNEESSASGASKSGKRHVKPVDPDPRGEKLLQIEYPLLEATKYLKLLQKNSPDSLETHLLSFELNMRKQKVLLAFQAVKQLLRLDAEHPDSHRCLIKFFHKVGSMNAPVTDSEKLIWSVLEAERPTISELHEKSLSETNNSFLEKHKESLMHRAAFAEILYILDTNKRSEAVKLIEESTNDLAPTNGALGPVRQWKLKDCIAVHKLLVTVLVDQDAALRWKAHCAEYFPYSTYFEGKRSSAFSNSFLNQICKNSESGSPILFVGDQNVDSVTSNGKLEPFKDLAI 901
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g02264 901 MobiDBLite consensus disorder prediction 579 642 - -
Bva08g02264 901 Pfam TPR repeat 84 123 - -
Bva08g02264 901 SUPERFAMILY TPR-like 18 158 IPR011990 GO:0005515
Bva08g02264 901 PANTHER BNAC02G23120D PROTEIN 10 883 - -
Bva08g02264 901 SUPERFAMILY TPR-like 191 427 IPR011990 GO:0005515
Bva08g02264 901 SUPERFAMILY TPR-like 381 707 IPR011990 GO:0005515
Bva08g02264 901 Coils Coil 195 215 - -
Bva08g02264 901 SMART tpr_5 380 413 IPR019734 GO:0005515
Bva08g02264 901 SMART tpr_5 43 76 IPR019734 GO:0005515
Bva08g02264 901 SMART tpr_5 77 110 IPR019734 GO:0005515
Bva08g02264 901 ProSiteProfiles TPR repeat profile. 77 110 IPR019734 GO:0005515
Bva08g02264 901 Gene3D - 2 503 - -
Bva08g02264 901 PANTHER N-TERMINAL ACETYLTRANSFERASE-RELATED 10 883 - -
Bva08g02264 901 MobiDBLite consensus disorder prediction 579 594 - -
Bva08g02264 901 PIRSF NAT_A 1 818 IPR021183 -
Bva08g02264 901 Coils Coil 596 620 - -
Bva08g02264 901 MobiDBLite consensus disorder prediction 606 622 - -
Bva08g02264 901 Pfam N-terminal acetyltransferase A, auxiliary subunit 187 696 IPR021183 -
Bva08g02264 901 Gene3D - 505 725 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g02264 Bva-Chr8 14742214 14754131 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g02264 K20792 - gmx:100820094 1563.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g02264 08 14742214 14754131 Bva02g02442 02 23507229 23518402 BWGD
Bva08g02264 08 14742214 14754131 Bva08g02264 08 14742214 14754131 ECH