Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g02442 ATGGGTGCTTCTCTGCCCCCCAAAGAGGCCAACCTCTTCAAGCTTATTGTTAAATCATATGAAaccaaacaatacaaaaagGGGTTGAAAGCAGCCGATGccatattgaaaaaatttccCGACCATGGAGAGACTTTATCAATGAAGGGTTTAACATTAAATTGCATGGATCGGAAGTCTGAAGCATACGAACTTGTTCGTCAAGGACTAAAGAATGATCTCAAAAGTCATGTTTGCTGGCATGTCTATGGTCTCCTTTATCGTTCAGACAGAGAATATAGGGAAGCGATTAAGTGCTACCGAAATGCTCTGAAAATAGATCCTgacaatattgaaattttacgCGATCTATCACTCTTACAGGCTCAAATGCGAGATTTAACTGGGTTTGTTGAGACAAGACAACAACTTTTGACTCTCAAGCCAAATCATCGCATGAACTGGATTGGCTTTGCTGTTTCTCATCATTTGAACTCtaaTCCATCCAAGGCAGTTGAAATTCTGGAAGCATATGAAGGGACGTTGGAAGATGATTATCCTCCAGATAATGAACGGTGTGAGCATGGTGAAATGCTTTTATACAAGATTTCTATGTTAGAAGAATGTGGGAATTTTGAGAGAGCTCTTGAAGAGTTGCACAAAAAGGAATCAAAAATTGTTGATAAGCTTGCATATAAAGAACAAGAGGTTTCACTTTTAGTGAAGCTTGGGCACTTTGAAGAAGGCAAAATATTGTATTGGGGATTACTTTCCATGAACCCGGACAATTATAGataCTATGAAGGCCTCCAAAAATGTGTGGGTTTGTACtcagaaaatggaaattattCTCCTGATGAAATTGATCAGTTAGATGCCTTGTACAAATCACTTGGGCAGCAATATAAGTGGTCTTCTGCTGTTAAGAGAATACCACTTGATTTTCTACAAGGTGACAAATTTCAAGAAGCAGTGGACAATTATGTTAGGCCTCTCTTAACGAAGgGTGTTCCTTCCTTGTTCTctgatctttcttctttgtacaATCACCCTGGGAAGGCGGACATTTTGGAACATCTTATTCTTGAGTTAGAGCATTCAATTAGGACAACAGGTCAATTTCCTGGCAGCATTGAAAAAGATCCCCCCTCAACTCTGATGTggactttgtttttattggcTCAGCATTATGATAGGCGGGGACAGTATGAAATTGCCCTTTCTAAAATTGACGAGGCTATAGAACATACGCCAACTGTCATTGATTTGTATTCGGCTAAGAGTCGGATACTGAAGCATGCTGGTGATTTGGTGGCTGCTGCTGCTTTTGCAGATGAAGCTCGGTGTATGGATCTTGCTGATCGTTATGTTAATAGTGACTGTGTTAAGCGGATGCTTCAGGCTGACCAGGTGGCTTTGGCTGAAAAAACTGCTGTATTGTTCACTAAAGAGGGGGATCAACACAACAACCTCCATGATATGCAGTGCATGTGGTATGAACTTGCCTCTGGTGAAAGTTACTTCCGCCAAGGTGATCTTGGTCAGGCACTCAAGAAATTTTTAGCTGTGGAGAAGCATTATGCAGATATTACTGAAGATCAATTTGATTTCCATTCGTACTGCTTAAGGAAAATGACTTTGCGTACTTATGTGGAAATGCTTAAATTTCAAGATCGATTGCACTCACatgtatattttcataaagCAGCAGCTGGAGCTATCAGatgttatataaaattgtatgaCTCTCCTTCAAAGTCTACTTCTGTGGAAGATGATGAGATGTCTAAGTTGCTTCCTtctcagaaaaagaaaatgaggcaaaaacaaagaaaggcaGAAGCACGGGCTAAGAAAGAggcagaagaaaagaatgaagagTCAAGTACTAGTGGTGTATCAAAGTCTGGAAAACGACATGTCAAACCTGTTGATCCAGATCCTCATGGGGTGAAGCTGTTGCAGATTGAAGATCCATTGTTTGAAGCCACAAAGTACTTGAAGTTGCTGCAGAAGAACTCTCCTGATTCATTGGAGACACACTTGCTctcttttgaattatatatgagaaaacaaaagattttgcTTGCTTTTCAGGCTGTGAAGCAGCTACTGAGGTTGGATGCTGAACACCCTGATTCTCACCGTTGTTTGATTAAATTCTTCCATAAAGTGGGATCCATGAATGCTCCAGTCAATGACAGTGAAAAACTCATTTGGAGTGTCTTAGAAGCTGAGCGCTCAACCATTAGTGAGTTGCATGAGAAGTCTCTGTTTGAGGCAAACAACTCTTTCCTGGAAAAACATAAAGAGTCTTTGATGCATAGAGCTGCCTTTGCTCAGATGCTGTACATTTTGGATTCCAATAAAAGGTCTGAAGCCGTTAAGTTGATTGAAGAGTCAACAAATGACCTTACACCAAGCAATGGAACTCTGGCACCAGTCAGGGAGTGGAAGCTTAAAGACTGTATTGCAGTTCATAAGCTTCTTGAGACCGTCCTTGTTGACCGCGATGCTGCATTGAGATGGAAAACACGTTGTGCAGAGTATTTCCCTTATTCTACATACTTCGAGGGCAAACACAGCTCTGCTTTTCCCAACTCGCTCTTCAATAAGATGCGTAATAACTCTGAAAATGGGAGTCATAACCAATCAGTTGCTGATCAAAATGTTGACTCTGTCACATCAAATGGGAAATTAGAGTCGTTTAAAGATCTCACGATCTG 2705 0.3771 MGASLPPKEANLFKLIVKSYETKQYKKGLKAADAILKKFPDHGETLSMKGLTLNCMDRKSEAYELVRQGLKNDLKSHVCWHVYGLLYRSDREYREAIKCYRNALKIDPDNIEILRDLSLLQAQMRDLTGFVETRQQLLTLKPNHRMNWIGFAVSHHLNSNPSKAVEILEAYEGTLEDDYPPDNERCEHGEMLLYKISMLEECGNFERALEELHKKESKIVDKLAYKEQEVSLLVKLGHFEEGKILYWGLLSMNPDNYRYYEGLQKCVGLYSENGNYSPDEIDQLDALYKSLGQQYKWSSAVKRIPLDFLQGDKFQEAVDNYVRPLLTKGVPSLFSDLSSLYNHPGKADILEHLILELEHSIRTTGQFPGSIEKDPPSTLMWTLFLLAQHYDRRGQYEIALSKIDEAIEHTPTVIDLYSAKSRILKHAGDLVAAAAFADEARCMDLADRYVNSDCVKRMLQADQVALAEKTAVLFTKEGDQHNNLHDMQCMWYELASGESYFRQGDLGQALKKFLAVEKHYADITEDQFDFHSYCLRKMTLRTYVEMLKFQDRLHSHVYFHKAAAGAIRCYIKLYDSPSKSTSVEDDEMSKLLPSQKKKMRQKQRKAEARAKKEAEEKNEESSTSGVSKSGKRHVKPVDPDPHGVKLLQIEDPLFEATKYLKLLQKNSPDSLETHLLSFELYMRKQKILLAFQAVKQLLRLDAEHPDSHRCLIKFFHKVGSMNAPVNDSEKLIWSVLEAERSTISELHEKSLFEANNSFLEKHKESLMHRAAFAQMLYILDSNKRSEAVKLIEESTNDLTPSNGTLAPVREWKLKDCIAVHKLLETVLVDRDAALRWKTRCAEYFPYSTYFEGKHSSAFPNSLFNKMRNNSENGSHNQSVADQNVDSVTSNGKLESFKDLTI 901
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g02442 901 PANTHER BNAC02G23120D PROTEIN 10 883 - -
Bva02g02442 901 Gene3D - 505 725 - -
Bva02g02442 901 SMART tpr_5 380 413 IPR019734 GO:0005515
Bva02g02442 901 SMART tpr_5 43 76 IPR019734 GO:0005515
Bva02g02442 901 SMART tpr_5 77 110 IPR019734 GO:0005515
Bva02g02442 901 SUPERFAMILY TPR-like 191 427 IPR011990 GO:0005515
Bva02g02442 901 Pfam N-terminal acetyltransferase A, auxiliary subunit 187 696 IPR021183 -
Bva02g02442 901 ProSiteProfiles TPR repeat profile. 77 110 IPR019734 GO:0005515
Bva02g02442 901 MobiDBLite consensus disorder prediction 579 594 - -
Bva02g02442 901 PANTHER N-TERMINAL ACETYLTRANSFERASE-RELATED 10 883 - -
Bva02g02442 901 Gene3D - 2 503 - -
Bva02g02442 901 SUPERFAMILY TPR-like 18 159 IPR011990 GO:0005515
Bva02g02442 901 PIRSF NAT_A 1 818 IPR021183 -
Bva02g02442 901 Coils Coil 596 620 - -
Bva02g02442 901 MobiDBLite consensus disorder prediction 577 642 - -
Bva02g02442 901 MobiDBLite consensus disorder prediction 606 622 - -
Bva02g02442 901 Pfam TPR repeat 84 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g02442 Bva-Chr2 23507229 23518402 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g02442 K20792 - gmx:100820094 1576.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g02264 08 14742214 14754131 Bva02g02442 02 23507229 23518402 BWGD
Bva02g02442 02 23507229 23518402 Bva02g02442 02 23507229 23518402 ECH