Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g02145 ATGGCGACAAATGAGGAATCCTGTTCTACTCAGCTTATCGATGGTGATGGCACATTCAATGATGATGGGattgaaaaatttatgaagGAAGTGAAATTGGCTGAATGCGGGCTTTCATATGCTGTAGTTTCTATTATGGGCCCCCAAAGTAGTGGTAAGAGCACGCTATTAAATAATCTGTTTGGTACCAACTTCAGGGAGATGGATGCTTTTAGGGGAAGGTCTCAAACAACTAAAGGAATTTGGATGGCAAAATGTGCTGGCATAGAGCCTTGTACACTTGTGATGGATTTGGAGGGTACAGATGGACGAGAACGTGGAGAGGATGATACTGCATTTGAAAAGCAGAGTTCTCTATTTGCCCTGGCTGTTTCAGATATAGTGCTAATAAATATGTGGTGCCATGACATTGGCCGTGAGCAAGCTGCAAATAAGCCTCTTTTGAAAACCGTGTTTCAGgTCATGATGAGATTGTTTAGTCCACGTAAAACAACATTGATGTTTGTCATACGTGATAAGACAAGGacaCCGCTTGAAAATTTAGAACCTGTTTTACGAGAAGACATTCAGAAGATATGGGACTCTGTGCCTAAGCCACAGGCCCACAAGGAAACCCCACTAAGTGAATTCTTCAATGTTGAAGTTGTTGCTCTTCCTAGttttgaagaaaaggaagaacaatTTAGAGAACAGGTTGCCAACTTGAGGCAACGGTTCTTTCATTCTATTGCTCCTGGTGGGCTTGCTGGGGACCGACGTGGAGTAGTCCCTGCTTCaggattttcttttagtgCACAGCAAATCTGGAAAGTCATTAAGGAGAACAAGGACTTAGATCTTCCTGCTCATAAGGTCATGGTTGCAACAGTGCGATGTGAAGAAATTGCCAATGAGAAATATGCTCTTTTTGTGGCTAATGAGGACTGGTGTCAGTTGGAAGAGGCTGTGCAATCTGGCCGAGTTCCCGGATTTGGAAAAAAGCTCAGTTCAATCCTTGCCTCTTGTCTGTCAGAGTATGACGCAGAAGCTACTTATTTTGATGAAGGTGTCAGATCTTCAAAACAAAAGCAGCTTCGAGAAAAATTGTTACAACTTGTCCAACCAGCATTCCAATCTGCACTGGGACACATCAGGTCTGAAACTTTTAGTAAGTTCAAGGAAATGTTTGACAAGGCTTTGAATGGAGGAGAAGGATTTTCTGCTGCTGCCGATAATTCCCTTAAGTTTTGTATGGCTCAGTTTGATGAAGCATGTGCAGATGTTATTATTGAACAAGCAAACTGGGATACATCTAAAGTAAGGGAGAAGCTGCAGCGTGATATTCATGCTCATGTTGATTCTGTACGTGAGGCTAAGCTATCTGAACTTACTTCATCATATGAGGAAAAACTGAAGGAGGCCATATGGGGACCTGTGGAAGCTCTTCTGGATGAAGCTAATAGTGAGACTTGGCCAGCAATAAGGAAGCTTCTTAAGCGTGAAACTGAACCAGCTGTATCAGGTATGTCTGCTGCACTTTCAGGGTTTGACATGGACGAAGaaatcaaacagaaaaaaattgcTAGTCTAGAAGATTATGCCAGAGGTGCGGTAGAAGCAAAAGCCAGGGAAGAAGCTGGACGAGTTTTGATCCGTATGAAGGAAAGGTTTACGATGTTATTTAGCCATGATTCTGATTCAATGCCTCGTATTTGGACGGCGAAGGAAGATATTCGAGCCATCACCAAGACTGCCCGCACTGCTTCCTTAAAGTTGCTATCTGTTATGGCTGCAATACGTCTGGATGATGCTGCAGCTGACAATATCGAGAAAACATTAACAGTTGCATTGGTGGATTCTGGGAGCCGTAATGTTAAAGATAGGAGTATTACAGGTGTTGATCCACTTGCTTCAAGCACATGGGAAAAgCTTCCATCCTCAAAAACGTTGATCACACCTGTTCAGTGCAAATCTTTGTGGAGGCAATTCCAGACAGAAACAGAGTACAGTGTCACTCAGGCCATTTCTGCACAGGAGGCAAACAAGCGTAACAACAGCTGGTTACCTCCTCCATGGGCAATCGCCGCTTTAGTTATTCTGGGATTTAATGAATTCATGACACTTCTAAGAAACCCCTTGTATGTAGGtgtcatctttcttggttatCTTCTCATGAAAGCCCTATGGGTGCAGCTGGACATTTCAGGCGAATTCCGCAATGGGGCTCTTCCGGGATTAATGTCCTTGTCTATGAAGTTTCTTCCAACTGTCATCAACCTTGTTAGAAAACTAGCAGAGGAGGGAGAGAATCCTGAAACTAACAATCCTCCGAGAAACCGATCAAAAAGCAATAGCAATCCTGTTACCGCAGGTAGTAATATGGTGTCTAGTGCTTCGTCTAACGTGACTTCAGGGGACGATGGAACCGAATACACTAGTGCATCAAAATATGATTA 2435 0.4189 MATNEESCSTQLIDGDGTFNDDGIEKFMKEVKLAECGLSYAVVSIMGPQSSGKSTLLNNLFGTNFREMDAFRGRSQTTKGIWMAKCAGIEPCTLVMDLEGTDGRERGEDDTAFEKQSSLFALAVSDIVLINMWCHDIGREQAANKPLLKTVFQVMMRLFSPRKTTLMFVIRDKTRTPLENLEPVLREDIQKIWDSVPKPQAHKETPLSEFFNVEVVALPSFEEKEEQFREQVANLRQRFFHSIAPGGLAGDRRGVVPASGFSFSAQQIWKVIKENKDLDLPAHKVMVATVRCEEIANEKYALFVANEDWCQLEEAVQSGRVPGFGKKLSSILASCLSEYDAEATYFDEGVRSSKQKQLREKLLQLVQPAFQSALGHIRSETFSKFKEMFDKALNGGEGFSAAADNSLKFCMAQFDEACADVIIEQANWDTSKVREKLQRDIHAHVDSVREAKLSELTSSYEEKLKEAIWGPVEALLDEANSETWPAIRKLLKRETEPAVSGMSAALSGFDMDEEIKQKKIASLEDYARGAVEAKAREEAGRVLIRMKERFTMLFSHDSDSMPRIWTAKEDIRAITKTARTASLKLLSVMAAIRLDDAAADNIEKTLTVALVDSGSRNVKDRSITGVDPLASSTWEKLPSSKTLITPVQCKSLWRQFQTETEYSVTQAISAQEANKRNNSWLPPPWAIAALVILGFNEFMTLLRNPLYVGVIFLGYLLMKALWVQLDISGEFRNGALPGLMSLSMKFLPTVINLVRKLAEEGENPETNNPPRNRSKSNSNPVTAGSNMVSSASSNVTSGDDGTEYTSASKYD 811
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g02145 811 Pfam Sey1 three-helix bundle domain 323 760 IPR046758 -
Bva08g02145 811 Coils Coil 218 238 - -
Bva08g02145 811 MobiDBLite consensus disorder prediction 765 811 - -
Bva08g02145 811 Gene3D - 12 274 IPR027417 -
Bva08g02145 811 PANTHER PROTEIN SEY1 5 811 IPR008803 -
Bva08g02145 811 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 10 277 IPR027417 -
Bva08g02145 811 CDD GBP 36 242 - -
Bva08g02145 811 PANTHER PROTEIN ROOT HAIR DEFECTIVE 3 HOMOLOG 5 811 - -
Bva08g02145 811 Pfam Root hair defective 3 GTP-binding protein (RHD3) GTPase domain 46 281 - -
Bva08g02145 811 MobiDBLite consensus disorder prediction 760 811 - -
Bva08g02145 811 ProSiteProfiles GB1/RHD3-type guanine nucleotide-binding (G) domain profile. 37 252 IPR030386 GO:0005525
Bva08g02145 811 Hamap Protein SEY1 [SEY1]. 9 765 IPR008803 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g02145 Bva-Chr8 14130003 14139649 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g02145 K22698 - gmx:100777656 1314.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g02145 08 14130003 14139649 Bva02g02291 02 22710690 22718942 BWGD