Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g02291 ATGGCAAGAAGCGACGATTGTAGTTCTACTCAGCTTATTGATGGAGATGGCACATTCAATGATGCTgggattgaaaattttatgaaggAGGTGAAATTGGCTGAATGTGGGCTTTCATATGCTGTAGTTTCTATTATGGGCCCTCAAAGTAGTGGGAAGAGCACACTATTAAATCATCTATTTGGTACCAACTTCAGGGAGATGGATGCTTTTAAGGGAAGGTCTCAAACAACTAAAGGAATTTGGATGGCAGAATGTGCTGGCATAGAGCCTTGTACAATTGTGATGGATTTGGAGGGTACAGATGGACGAGAACGTGGAGAGGACGATACTGCATTTGAAAAGCAGAGTGCTCTATTTGCTCTTGCTGTTTCAGATATTGTGCTAATAAACATGTGGTGTCATGATATTGGCCGTGAGCAAGCTGCAAATAAGCCTCTTTTGAAAACTGTGTTTCAGGTCATGATGAGATTGTTTAGTCCCCGCAAAACAACATTGATGTTCGTCATACGTGATAAGACAAGGaCACCACTTGAAAATCTAGAACCCGTTTTACGAGAAGACATTCAGAAGATATGGGACTCTGTGCCTAAGCCACAGGCCCACAAGGAAACCccattaagtgaatttttcaatGTTGAAGTTGTTGCTCTTCCTAGttttgaagaaaaggaagaacaatTTAAAGAACAGgTTGCCAGCTTGCGGCAGCGATTCTTTCATTCTATTGCTCCTGGTGGGCTTGCTGGGGACCGGCGTGGAGCAGTTCCTGCTTCaggattttcttttagttcACAGCAAATTTGGAAAGTCATTAAGGAGAACAAGGACTTGGATCTTCCTGCACATAAGGTCATGGTTGCAACTGTACGATGTGAAGAAATTGCCAATGAGAAATTTGCCCTTTTTGTAGCTAATGAGGACTGGCGTCAATTGGATGAGGCTGTGCAATCTGGCCAAGTTCCTGGATTTGGCAAAAAGCTTAGTTCTATCATTGCCTCTTGTCTATCAGAGTATAACTCAGAAGCTACTTATTTTGATGAAGGCGTTAGATCAGCAAAACATGTGCAGctgcaagaaaaattattacaaCTTGTCCAACCGGCATTCCAATCTGCACTGGGATACATCAGGTCTGGAACTTTTGATAAGTTCAAGGAATTGTTTGACAAAGCTTTGAATGGAGGCGAAGGGTTTTCTGTTGCTGCTGATAATTCCCTTCAGTTTTGTATGGCTCAGTTTGATCAAGGATGTGCAGATGTTATGATTGAACAAGCAAACTGGGATACATCTAAAGTAAGGGAGAAACTGCAGCGAGATATCCAAACTCATATTGATTCTGTTCGTGTGGCTAAGCTGTCTGAACTTACCTCATCATATGAGGCAAAACTGAAGGAGGCCTTATGGGGACCTGTGGACGCTCTTCTAGATGGAGCTAATAGTGAGACTTGGCCAACAATAAAGAAGCTTCTAAAGCGTGAAACTGAATCAGCTATATCAGGTCTCTCTGCTGCACTGTCAGGGTTTGATATGGATGAAGAAATCAGACAGAAAACAATTGCTAGTCTAAAGGATTATGCCAGAGGTGTGGTAGAAGCAAAAGCCAAGGAAGAAGCTGGACGAGTTTTGATCCGTATGAAGGACAGGTTTACGGTGTTGTTTAGCCATGATTCTGATTCCATGCCTCGTATTTGGACGGGGAAGGAAGATATTCGAGCCATAACCAAGACTGCCCGCACTTCTTCTTTGAAGTTGCTATCTGTTATGGCTGCAATTCGtatggatgatgatgatgatggtgtTGACGATATTGAGAAAACATTAGAAGTTGCACTGTTGGATTCTGGAAGCCATAATGTTAAAGATAGGAGTATTACAGCTGTTGATCCATTGGCTTCAAGCACTTGGGAAAAgCTTCCATCCTCAAAAACATTGATCACACCTGTTCAGTGCAAATCTTTGTGGAGGCAATTCAAGACAGAGACAGAGTACAGTGTTACTCAGGCCATTTCTGCACAGGAAGCCAACAAGCGTAGCAACAACTGGTTACCTCCTCCATGGGCAATCCTTGCTTTGATTATTCTGGGATTTAATGAATTCATGACACTTCTAAGAAACCCCTTGTATTTGTTTGTCATCTTTGttggttttcttcttgtgAAAGCCCTATGGGTGCAGCTGGACATTTCAGGCGAATTCCGCAATGGAGCTCTTCCGGGACTTATCTCCTTGTCTATGAAGTTTCTTCCAACTGTCATGAACCTTGTTAGAAAACTAGCAGAGGAGGGACAGAATCCTGGAACTAACAATCCTCAGAGAAACCCATCAAAAAGCAATCACAATGCTGTTATCGCTGGTAGCAATATGTCATCTAGTGCTTCCTCTAATGTAACTTCATCAGACAATGGAATTGAATACACAAGTTCATCAAAATATGATTA 2441 0.4015 MARSDDCSSTQLIDGDGTFNDAGIENFMKEVKLAECGLSYAVVSIMGPQSSGKSTLLNHLFGTNFREMDAFKGRSQTTKGIWMAECAGIEPCTIVMDLEGTDGRERGEDDTAFEKQSALFALAVSDIVLINMWCHDIGREQAANKPLLKTVFQVMMRLFSPRKTTLMFVIRDKTRTPLENLEPVLREDIQKIWDSVPKPQAHKETPLSEFFNVEVVALPSFEEKEEQFKEQVASLRQRFFHSIAPGGLAGDRRGAVPASGFSFSSQQIWKVIKENKDLDLPAHKVMVATVRCEEIANEKFALFVANEDWRQLDEAVQSGQVPGFGKKLSSIIASCLSEYNSEATYFDEGVRSAKHVQLQEKLLQLVQPAFQSALGYIRSGTFDKFKELFDKALNGGEGFSVAADNSLQFCMAQFDQGCADVMIEQANWDTSKVREKLQRDIQTHIDSVRVAKLSELTSSYEAKLKEALWGPVDALLDGANSETWPTIKKLLKRETESAISGLSAALSGFDMDEEIRQKTIASLKDYARGVVEAKAKEEAGRVLIRMKDRFTVLFSHDSDSMPRIWTGKEDIRAITKTARTSSLKLLSVMAAIRMDDDDDGVDDIEKTLEVALLDSGSHNVKDRSITAVDPLASSTWEKLPSSKTLITPVQCKSLWRQFKTETEYSVTQAISAQEANKRSNNWLPPPWAILALIILGFNEFMTLLRNPLYLFVIFVGFLLVKALWVQLDISGEFRNGALPGLISLSMKFLPTVMNLVRKLAEEGQNPGTNNPQRNPSKSNHNAVIAGSNMSSSASSNVTSSDNGIEYTSSSKYD 813
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g02291 813 MobiDBLite consensus disorder prediction 763 813 - -
Bva02g02291 813 ProSiteProfiles GB1/RHD3-type guanine nucleotide-binding (G) domain profile. 37 252 IPR030386 GO:0005525
Bva02g02291 813 Coils Coil 218 238 - -
Bva02g02291 813 Gene3D - 14 252 IPR027417 -
Bva02g02291 813 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 11 275 IPR027417 -
Bva02g02291 813 Pfam Sey1 three-helix bundle domain 323 762 IPR046758 -
Bva02g02291 813 CDD GBP 36 242 - -
Bva02g02291 813 Hamap Protein SEY1 [SEY1]. 9 764 IPR008803 -
Bva02g02291 813 MobiDBLite consensus disorder prediction 762 813 - -
Bva02g02291 813 PANTHER PROTEIN ROOT HAIR DEFECTIVE 3 HOMOLOG 4 813 - -
Bva02g02291 813 PANTHER PROTEIN SEY1 4 813 IPR008803 -
Bva02g02291 813 Pfam Root hair defective 3 GTP-binding protein (RHD3) GTPase domain 46 281 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g02291 Bva-Chr2 22710690 22718942 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g02291 K22698 - gmx:100777656 1320.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g02145 08 14130003 14139649 Bva02g02291 02 22710690 22718942 BWGD