Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g02120 ATGTTTAACGTTGTCCCCAACGTTGTCTCTGATGTCTTTGGCCTCAACAGAGGCAAGATCAAAGGGACAGTGATTCTGATGAGAAAGAATGTGTTAATCGACGTCAGCGACGTTGGTTCCACAGttattgataatattaaagaaCTTGTAGGCCAGGGGGTCACTCTCCAGTTGATTAGCTCTGTCAATGGTGATCCTGGAAATGGGTTGAAAGGAAAAGTTGGAAAACCTGCATATCTAGAGAGTTGGCTCACCTCGTTCCCATCCTTGATATCGGGCCAGTCTGCATTCACAGTTCActttgaatatgaaaatgacaTTGGTGTCCCTGGAGCTTTCATCATAAGGAACAATCATTTCAGTGAGTTCTTCCTTGTAAGCTTGACACTTGAAGGCATTCCAAACCATGGAGACATCCACTTTGTTTGCAACTCCTGGGTTTATCCAGCAAGCAACTACAAAAAGGATCGCATTTTCTTCGCAAACAAGTCATACCTTCCAAGTGAAACACCAGCTCCACTGATCAAGTATAGAGAAGAAGAGCTAGAGAGTTTAAGAGGTGACGGTACTGGGGAGCGCCAGAAATGGGAAAGGATCTATGATTATGATGTCTACAATGATTTGGGCTACCCTGATAAGGGTGCTGAGCATGCTAGACCAATTCTTGGAGGATCAAGCACATACCCCTACCCTCGCAGGGGAAGAACTGGAAGAGCACCAACAAAAACAGATCCTAAGAGTGAGAGCACTCTCCTTAATAGTTTAAACATCTATGTTCCAAGAGATGAAAGATTTGGTCACTTGAAGATGTCAGACTTTCTCACTTATGGACTGAAATCTGTATCTCAAAACATAATGCCCAAGTTGGGAAGTCTGTTTGATAAAGAGTTTGACAGCTTTGAAGAAGTACGCCAACTCCACGAAGGTGGGATTAAGCTACCTGTAGATATACTTAATGCTATCAGTGAGCAAATCCCAGGAGCAATGCTCAAGGAAATCTTCAGATCTGATGGTGAACAGCTCCTCAAATTTCCATTGCCTCATGTGATTAGAGAGAACAAGTCTGCATGGATGACTGATGAAGAATTTGCAAGAGAGATGCTTGCTGGTGTAAATCCAGGCTTGGTTCGCCGTCTCCAaGAGTTCCCATCACGAAGCAAGCTAGATAGTCGAGTCTATGGTGACCAAACCAgcaaaataaccaaacaaCAGTTGGAGATTAACCTTGGTGGGCTCAGCGTTGATCAGGCCCTCAACTCAAAGAGATTGTTCATATTAGATCACCATGATCCAATTATTCCATATCTGAGGCGCATCAACTTAACTACAACCAAGGCTTATGCCAGCAGGACAATCCTTTTCTTGAAAGATGATGGAACTTTGAAGCCATTGGCCATTGAATTAAGCGTACCCCACCCAGATGGAGATCAGTTTGGTGTGGTTAGCAAAGTATACTTGCCTGCAGAACATGGTGTTAATAGTTCAATTTGGATGCTGGCCAAAGCTTATGTGATCGTAAATGACTCGTGCTTCCATCAACTTGTTAGCCACTGGTTGAATACTCATGCAGTGATTGAGCCATTCATCATAGCAACAAACAGGCATCTCAGTGTGCTTCACCCAATTTACAAGCTGCTTCTTCCTCACTATCGCGACACCATGACCATAAATGCATTTGCAAGAGAGTTCCTGATCAATGCAGGAGGTATTATAGAGTCAACATTTCTGTGGGGAGGGTATTCTTTGGAGATGTCTTCAAAGATTTACAAGGACTGGGTTTTCCCTGAGCAAGCATTACCTGTTGATCTCGTCAAGAGAGGAATGGCAGAGGAGGACCCATCATCCCCTCATGGGGTTCGCCTTGTGATAGAAGATTACCCTTTTGCTGCTGATGGGTTGGAGATATGGGATGCTATCAAGACATGGGTTCATGACTATGTCTACTTCTACTACAAGTCTGATGACGCACTCAGAAAAGACTCAGAACTCCAAGCTTGGTGGAAAGAAGTGGTAGAGGTTGGCCATGGCGACAAGAAGAATGAGCCATGGTGGTTCAAGATGCAAACTCGAGACGAGCTTGTTGAATCCTGCTCCATTGTCATATGGGTTTCTTCAGCCCTTCATGCTGCTGTAAACTTTGGACAGTACCCTTACGGAGGGTACATCCTAAACAGGCCAACGCTTAGCAGAAGATTCATACCAGAAGAAGGAACTCCAGAGTATGATGAGCTCGTGAAGGATCCTCAGAGAGCTTACTTGAAGACAGTTACACCAAAGGGTGTGGCTCTTACTGATCTCTCAACCATAGAAATCTTGTCAAGGCACACTTCTGACGAGTACTATCTTGGGGAGAGAGACAATCCCAATTGGACATCTGATACAGAGCCATTAGAGGCATTCAAGAAGTTTGGAAAGAAACTGTCTGAGATTGAGGAAAAACTGACAAACAGGAACAAGGATGCGAGATTGAGAAACAGGTTTGGGCCGGTTAATATGCCATACACTCTGCTCTATCCTAGCAGCGAAGATGGGTTGACAGCAAGAGGAATTCCTAATAGTATCTCTATCTA 2570 0.435 MFNVVPNVVSDVFGLNRGKIKGTVILMRKNVLIDVSDVGSTVIDNIKELVGQGVTLQLISSVNGDPGNGLKGKVGKPAYLESWLTSFPSLISGQSAFTVHFEYENDIGVPGAFIIRNNHFSEFFLVSLTLEGIPNHGDIHFVCNSWVYPASNYKKDRIFFANKSYLPSETPAPLIKYREEELESLRGDGTGERQKWERIYDYDVYNDLGYPDKGAEHARPILGGSSTYPYPRRGRTGRAPTKTDPKSESTLLNSLNIYVPRDERFGHLKMSDFLTYGLKSVSQNIMPKLGSLFDKEFDSFEEVRQLHEGGIKLPVDILNAISEQIPGAMLKEIFRSDGEQLLKFPLPHVIRENKSAWMTDEEFAREMLAGVNPGLVRRLQEFPSRSKLDSRVYGDQTSKITKQQLEINLGGLSVDQALNSKRLFILDHHDPIIPYLRRINLTTTKAYASRTILFLKDDGTLKPLAIELSVPHPDGDQFGVVSKVYLPAEHGVNSSIWMLAKAYVIVNDSCFHQLVSHWLNTHAVIEPFIIATNRHLSVLHPIYKLLLPHYRDTMTINAFAREFLINAGGIIESTFLWGGYSLEMSSKIYKDWVFPEQALPVDLVKRGMAEEDPSSPHGVRLVIEDYPFAADGLEIWDAIKTWVHDYVYFYYKSDDALRKDSELQAWWKEVVEVGHGDKKNEPWWFKMQTRDELVESCSIVIWVSSALHAAVNFGQYPYGGYILNRPTLSRRFIPEEGTPEYDELVKDPQRAYLKTVTPKGVALTDLSTIEILSRHTSDEYYLGERDNPNWTSDTEPLEAFKKFGKKLSEIEEKLTNRNKDARLRNRFGPVNMPYTLLYPSSEDGLTARGIPNSISI 856
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g02120 856 Gene3D - 166 268 - -
Bva08g02120 856 ProSiteProfiles PLAT domain profile. 27 161 IPR001024 GO:0005515
Bva08g02120 856 Pfam PLAT/LH2 domain 60 160 IPR001024 GO:0005515
Bva08g02120 856 SUPERFAMILY Lipoxigenase 166 856 IPR036226 -
Bva08g02120 856 Pfam Lipoxygenase 174 839 IPR013819 GO:0016702|GO:0046872
Bva08g02120 856 SUPERFAMILY Lipase/lipooxygenase domain (PLAT/LH2 domain) 19 165 IPR036392 GO:0005515
Bva08g02120 856 PRINTS Lipoxygenase signature 494 511 IPR013819 GO:0016702|GO:0046872
Bva08g02120 856 PRINTS Lipoxygenase signature 532 552 IPR013819 GO:0016702|GO:0046872
Bva08g02120 856 PRINTS Lipoxygenase signature 512 529 IPR013819 GO:0016702|GO:0046872
Bva08g02120 856 ProSitePatterns Lipoxygenases iron-binding region signature 1. 512 526 IPR020833 GO:0016702|GO:0046872
Bva08g02120 856 Gene3D - 356 489 - -
Bva08g02120 856 Gene3D - 269 355 IPR027433 -
Bva08g02120 856 ProSiteProfiles Lipoxygenase iron-binding catalytic domain profile. 164 856 IPR013819 GO:0016702|GO:0046872
Bva08g02120 856 SMART LH2_4 18 162 IPR001024 GO:0005515
Bva08g02120 856 PANTHER SEED LINOLEATE 9S-LIPOXYGENASE-3 21 856 - -
Bva08g02120 856 Gene3D - 490 855 - -
Bva08g02120 856 PRINTS Plant lipoxygenase signature 131 149 IPR001246 GO:0016491
Bva08g02120 856 PRINTS Plant lipoxygenase signature 342 358 IPR001246 GO:0016491
Bva08g02120 856 PRINTS Plant lipoxygenase signature 447 471 IPR001246 GO:0016491
Bva08g02120 856 PRINTS Plant lipoxygenase signature 769 783 IPR001246 GO:0016491
Bva08g02120 856 PRINTS Plant lipoxygenase signature 294 315 IPR001246 GO:0016491
Bva08g02120 856 PRINTS Plant lipoxygenase signature 196 212 IPR001246 GO:0016491
Bva08g02120 856 PRINTS Plant lipoxygenase signature 229 248 IPR001246 GO:0016491
Bva08g02120 856 PRINTS Plant lipoxygenase signature 381 400 IPR001246 GO:0016491
Bva08g02120 856 PRINTS Plant lipoxygenase signature 157 178 IPR001246 GO:0016491
Bva08g02120 856 PANTHER LIPOXYGENASE 21 856 IPR000907 GO:0016702|GO:0046872
Bva08g02120 856 MobiDBLite consensus disorder prediction 221 248 - -
Bva08g02120 856 Gene3D PLAT/LH2 domain 13 165 - -
Bva08g02120 856 ProSitePatterns Lipoxygenases iron-binding region signature 2. 539 549 IPR020834 GO:0016702|GO:0046872
Bva08g02120 856 CDD PLAT_LH2 19 162 IPR042057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g02120 Bva-Chr8 13990605 13994298 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g02120 19 856 Acyl Lipid Metabolism Gene Families AT1G55020 62.485 0.0 1116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g02120 K15718 - gmx:547869 1252.27
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g02120 08 13990605 13994298 Bva02g02260 02 22495382 22499113 BWGD