Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g02260 ATGTTTCCAAAATTTGTGCCCAGCATCCCCAATGTCGTCCCTGACGTCTTAGGCCTCAACAAGGGCAGAAAGATCAAAGGGACTGTGGTTTTGATTAAGAAGAATCTCATAGACTTCAGCGACGTCGTTGGCTCTGTAGTTGGTGTCACTACCTCAGTAGTTGATCAGTTCACTGAGGTTATAGCCAAAGGCATCACTCTCCAGTTGGTCAGTTCCACCAATGCTGACCCTGCAAATGAGTTGAAAGGAAAGGTTGGAAAGCCTGCAAGTTTGGAAAGCTGGTTTGGCAGCATCCCAAACTTGACAGGAGCTGAGACCGGATTCACTGTTCGCTTTGATTATGAAGAAGACATTGGGGTTCCAGGAGCATTCCTGATCAAGAACAATCATCTCACTGAGTTCTTTCTTGTTCGTTTGACACTTCATGATGTTCCAAACCATGGTGACATCCACTTTGTCTGCAACTCATGGGTTTACCCAGCAAGCTCTTACAAATCAGCTCGCATTTTCTTTGCCAACAAGACATATCTTCCATGTGAAACCCCACAAGCACTGCTCAAGTACAGAGAAGAAGAACTGGTGAACTTGAGAGGAGATGGAACAGGAGAACGACAAAAATGGGACAGGATCTATGATTATGATGTCTACAATGATCTGGGCAATCCAGATATTCTTACAAGCCTTGCTCGCCCAGTTATTGGAGGGTCTAGCACATATCCCTATCCTCGCAGGGGAAGAACCGGGAGACCTCGAACAAAGTCAGACCCAGAAAGTGAAAGCAGGTTGTTTCCTGTTGTCAAGGACTTTGACATTTATGTTCCAAGAGATGAACGATTTGGTCACTTGAAGACAGCAGACTTTCTGACTTATATGCTGAAATCTGTGGATCAAAATCTCAGACCAGCATTAGAATATGCCTTCACTTTCTTGTCAAATGAgtttaaagattttgaagatgTGCGTGAACTCTATGAAGGTGGCTTTAAGCTCCCTCATGATGTACTTAAGAGTATCAGTGACCAAATCCCAACGCCAATGCTCAAGGAAATTTTCCGAACTGATGGCGAGCAGAGCCTCAGATTTCCAACACCTCGAATCATTCAAGAGAACAAGTCTGCATGGATGACTGATGAAGAATTTGCAAGAGAAATGCTTGCCGGTGTAAATCCCGGCTTAATTTGCTGTCTTAAAGAGTTCCCACCTAAGAGCAAGCTGGATCCTAATGTCTATGGTGATCAGACAAGCACCATAACAAAACAACACTTAGAGATTAACTTAGATGGGTGTACTGTAGATGAGGCAATCCGCAATAACAGGTTGTTCATATTGGATCACCACGATGCATTTATGCCATATTTAAGGCGGATAAATGAAACATCCTACAAGGCCTATGCCAGTAGGACAATCCTTTTCTTGAAAGAGGATGGAACTTTGAAGCCAGTGGCCATTGAATTAAGTTTACCACACCCAGATGGAGACAAGTGTGGTGCAGAAAGTACTGTCATTCTTCCTGCTGAACAAGGTGTTGAGGGTACCATTTGGCTTCTGGCAAAAGCTTATGTGTCCGTAAATGATTCGGGCTATCATCAACTTATTAGCCACTGGTTGAATACTCATGCAGTAATTGAGCCATTCATCATAGCAACTAACAGGCATCTCAGTGTACTTCACCCCATTCATAAACTTCTGCATCCTCATTATCGTGACACCATGAATATAAATGCACTTGCAAGGCAGGCCCTAATCAATGCAAGTGGCATTATAGAGTTAACATTCTTGCCCGGAAAGTATGCGATAGAGATGTCTTCCTTGGTTTACAAGAACTGGGCTTTCCATGAGCAAGCACTACCAGTTGATCTTATCAAAAGAGGAATGGCGGTGGAGGATCCATCTTGCCCACATGGCCTGCGCCTTGTGATAGAAGATTACCCTTTTGCTGTTGATGGGCTAGAGATCTGGAATGCCATCAAGACATGGGTTCATGACTATGTCTCCTTCTATTACAAGACAGATGAGGTGGTCCAACAAGACACTGAACTCCAATGCTGGTGGAAAGAAATAGTAGAGGTTGGTCATGGTGACAAGAAAGATGAGCCATGGTGGTTCAAGATGCAAACTCGCGACGAGCTCGTCGAAGCTTGCACCATCATTATATGGACTGCTTCAGCCCTTCACGCATCTGTCAATTTTGGGCAGTATCCTTATGGAGGCTACATTGTGAATCGCCCAACTCTTAGCAGAAGATTGATTCCTAAACAAGGAACTCCAGAGTATGACGAAATGGTGAAGAGCCCACACACTGCTTTCTTGAGAACAATTACACCAAAGCTCCAAACCCTTATTGACCTTTCAGTCATAGAAATATTGTCAAGGCATGCTTCTGACGAGCTCTATCTTGGCCAAAGAGAGGATCCTAATTGGACATCTGATGCAAAGCCATTGGAGTTGTTTAAGAAGTTTGGGAAGAAGCTTGAAGAGATTGAGAAGAAGCTTATACAGAGGAACCATGATGAGAAACTCAGAAACAGAACTGGGCCAATTAATATGCCTTACACTCTTCTTTATCCAAAGAGTGAGAAGGGACTTACTGCCAAAGGAATTCCCAACAGCATCTCCATCTA 2621 0.4349 MFPKFVPSIPNVVPDVLGLNKGRKIKGTVVLIKKNLIDFSDVVGSVVGVTTSVVDQFTEVIAKGITLQLVSSTNADPANELKGKVGKPASLESWFGSIPNLTGAETGFTVRFDYEEDIGVPGAFLIKNNHLTEFFLVRLTLHDVPNHGDIHFVCNSWVYPASSYKSARIFFANKTYLPCETPQALLKYREEELVNLRGDGTGERQKWDRIYDYDVYNDLGNPDILTSLARPVIGGSSTYPYPRRGRTGRPRTKSDPESESRLFPVVKDFDIYVPRDERFGHLKTADFLTYMLKSVDQNLRPALEYAFTFLSNEFKDFEDVRELYEGGFKLPHDVLKSISDQIPTPMLKEIFRTDGEQSLRFPTPRIIQENKSAWMTDEEFAREMLAGVNPGLICCLKEFPPKSKLDPNVYGDQTSTITKQHLEINLDGCTVDEAIRNNRLFILDHHDAFMPYLRRINETSYKAYASRTILFLKEDGTLKPVAIELSLPHPDGDKCGAESTVILPAEQGVEGTIWLLAKAYVSVNDSGYHQLISHWLNTHAVIEPFIIATNRHLSVLHPIHKLLHPHYRDTMNINALARQALINASGIIELTFLPGKYAIEMSSLVYKNWAFHEQALPVDLIKRGMAVEDPSCPHGLRLVIEDYPFAVDGLEIWNAIKTWVHDYVSFYYKTDEVVQQDTELQCWWKEIVEVGHGDKKDEPWWFKMQTRDELVEACTIIIWTASALHASVNFGQYPYGGYIVNRPTLSRRLIPKQGTPEYDEMVKSPHTAFLRTITPKLQTLIDLSVIEILSRHASDELYLGQREDPNWTSDAKPLELFKKFGKKLEEIEKKLIQRNHDEKLRNRTGPINMPYTLLYPKSEKGLTAKGIPNSISI 873
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g02260 873 SUPERFAMILY Lipase/lipooxygenase domain (PLAT/LH2 domain) 23 176 IPR036392 GO:0005515
Bva02g02260 873 PANTHER LINOLEATE 9S-LIPOXYGENASE 1 21 873 - -
Bva02g02260 873 MobiDBLite consensus disorder prediction 236 259 - -
Bva02g02260 873 Gene3D PLAT/LH2 domain 17 176 - -
Bva02g02260 873 SMART LH2_4 23 173 IPR001024 GO:0005515
Bva02g02260 873 PRINTS Plant lipoxygenase signature 786 800 IPR001246 GO:0016491
Bva02g02260 873 PRINTS Plant lipoxygenase signature 168 189 IPR001246 GO:0016491
Bva02g02260 873 PRINTS Plant lipoxygenase signature 398 417 IPR001246 GO:0016491
Bva02g02260 873 PRINTS Plant lipoxygenase signature 311 332 IPR001246 GO:0016491
Bva02g02260 873 PRINTS Plant lipoxygenase signature 359 375 IPR001246 GO:0016491
Bva02g02260 873 PRINTS Plant lipoxygenase signature 142 160 IPR001246 GO:0016491
Bva02g02260 873 PRINTS Plant lipoxygenase signature 207 223 IPR001246 GO:0016491
Bva02g02260 873 PRINTS Plant lipoxygenase signature 240 259 IPR001246 GO:0016491
Bva02g02260 873 PRINTS Plant lipoxygenase signature 464 488 IPR001246 GO:0016491
Bva02g02260 873 Pfam Lipoxygenase 185 856 IPR013819 GO:0016702|GO:0046872
Bva02g02260 873 ProSitePatterns Lipoxygenases iron-binding region signature 2. 556 566 IPR020834 GO:0016702|GO:0046872
Bva02g02260 873 Gene3D - 283 372 IPR027433 -
Bva02g02260 873 Pfam PLAT/LH2 domain 68 171 IPR001024 GO:0005515
Bva02g02260 873 SUPERFAMILY Lipoxigenase 177 873 IPR036226 -
Bva02g02260 873 ProSiteProfiles PLAT domain profile. 43 172 IPR001024 GO:0005515
Bva02g02260 873 CDD PLAT_LH2 24 173 IPR042057 -
Bva02g02260 873 Gene3D - 507 872 - -
Bva02g02260 873 PRINTS Lipoxygenase signature 511 528 IPR013819 GO:0016702|GO:0046872
Bva02g02260 873 PRINTS Lipoxygenase signature 529 546 IPR013819 GO:0016702|GO:0046872
Bva02g02260 873 PRINTS Lipoxygenase signature 549 569 IPR013819 GO:0016702|GO:0046872
Bva02g02260 873 Gene3D - 373 506 - -
Bva02g02260 873 PANTHER LIPOXYGENASE 21 873 IPR000907 GO:0016702|GO:0046872
Bva02g02260 873 ProSitePatterns Lipoxygenases iron-binding region signature 1. 529 543 IPR020833 GO:0016702|GO:0046872
Bva02g02260 873 Gene3D - 177 282 - -
Bva02g02260 873 ProSiteProfiles Lipoxygenase iron-binding catalytic domain profile. 175 873 IPR013819 GO:0016702|GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g02260 Bva-Chr2 22495382 22499113 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g02260 23 873 Acyl Lipid Metabolism Gene Families AT1G55020 62.837 0.0 1122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g02260 K15718 - zju:107412008 1177.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g02120 08 13990605 13994298 Bva02g02260 02 22495382 22499113 BWGD