Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g01870 ATGGCGGAAGAATCGGAGAGTACGGTCACTGGTGGTGAATCACTGATCGAGAAGATCAGCGAGAAGCTTCACGATCATGATTCATCGTCTTCCTCGGATTCCGATTCCGATTCCGAGAAACATGATACTTCGTCCGTCAAGGAAAAGGTTTACCGACTTTTCGGGCGGGAAAAGCCGGTTCATTCGGTTCTTGGCGGTGGAAAGCCTGCTGATGTCCTCTTGTGGAGGAACAAGAAGATATCTGCTAGTGTACTTGGTGTAGCAACTGCAGTCGCGCATACCTTTATCCACAAAACTCCACCTCACATCCCAGAAATTCATATTCCTGAGGAACCGATCCTGCAAGTTGCATCTGCTCTCAGAATTGAAATCAACAGGGGATTTGCAGTTCTGCGTAATATTGCATCTGGACGAGATCTGAAGAAGTTCCTCATTGCTATTGCTGGCTTGTGGATTTTATCCGTTGTGGGGAATTGGTCCAATTTCTTGACCTTGTTCTACATATCTTTTGTCTTGTTGCATACGGTTCCTGTTCTGTACGAGAAGCATGAGGATAAGGTTGATCCGTTTGCAGAGAGAGCAGCAAATGAGCTTAAAAAGCACTATGCCGTCCTTGATGCTAAGGTCTTGAGTAAGATTCCTAAGGGTCCGTTGAAAGGAACAGATGTGAGGGACCGGTTCTCAACCCGGGAGTTGGAGCCTTGGCAGCCTGCCTCTGCTCCATGCTCAATCTTTCGTTCAGGTATTCCCAATTCCCACTA 761 0.4717 MAEESESTVTGGESLIEKISEKLHDHDSSSSSDSDSDSEKHDTSSVKEKVYRLFGREKPVHSVLGGGKPADVLLWRNKKISASVLGVATAVAHTFIHKTPPHIPEIHIPEEPILQVASALRIEINRGFAVLRNIASGRDLKKFLIAIAGLWILSVVGNWSNFLTLFYISFVLLHTVPVLYEKHEDKVDPFAERAANELKKHYAVLDAKVLSKIPKGPLKGTDVRDRFSTRELEPWQPASAPCSIFRSGIPNSH 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g01870 253 ProSiteProfiles Reticulon domain profile. 96 226 IPR003388 -
Bva08g01870 253 PANTHER RETICULON 1 91 IPR045064 GO:0009617
Bva08g01870 253 Pfam Reticulon 91 193 IPR003388 -
Bva08g01870 253 PANTHER RETICULON 92 220 IPR045064 GO:0009617
Bva08g01870 253 PANTHER RETICULON-LIKE PROTEIN 92 220 - -
Bva08g01870 253 PANTHER RETICULON-LIKE PROTEIN 1 91 - -
Bva08g01870 253 MobiDBLite consensus disorder prediction 17 44 - -
Bva08g01870 253 MobiDBLite consensus disorder prediction 1 44 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g01870 Bva-Chr8 12615595 12618186 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g01870 - - gmx:100793862 289.271
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g01870 08 12615595 12618186 Bva12g01988 12 15739152 15744876 ECH
Bva08g01870 08 12615595 12618186 Bva08g01870 08 12615595 12618186 ECH