Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g01823 ATGTCAGAAGTTGACATGGCGGTTATTAAACCTGAGATGATGAAGCCCTATGTCTGGCTTCAGACTTCTGATGGTTCAATCCAACAAGTGGAACAAGAAATTGCAATGTTTTGCCCTCTGATATGTCatgaaataatacaaaaaggCACGGGAACTTCCAAAAATCATGCAATATGTCTTCCCCAACGAGTTAGTCCTGCAATGTTGAGTTTAATTCTTGATTATTGTCGATTTCATCAAACACCGGGTCGCTCGAACAAGGAACGGAAATCTTTCGATGAAAAATTCATTCGAATGGACACAAAGAGGCTTTGTGAGTTAACATCTGCTGCAGACAGTCTTCAATTAAAGCCTCTTGTTGATCTAACCAGTCGTGCACTTGCGCGaataattgaaggaaaaaCACCAGAGGAGATACGTGAGATATTTCATTTGCCTGATGATCTTACTGAGgaagaaaaattagagCCCTTAAAAAACACAACTGATGATCCAAGGATCCGGCTTTTGAACCGTTTGTATGCCAAGAAGAGGAAAGAACTAAAAGAACGTGAGAGATTAAAGAatgttgaagttgaagaagagCATGTAGATGAACGTTCTGTTGAtgatcttttatcttttattaatgGAAACGAGGGAGATCCAAAGGGGATTAAAACctccaagaataaaaaaaagaaccgGAGAAAAAAAGACCAACAGAAGAATTCTTCATCGAAGGAAACTTCTGAACTCAATAAGAAGgAGTCAAACGGTCATAATATCAGATACCAAAGTGCTGAAGCTGCTAGAATTGGCGAGACATCAAATTTGCGCGATACTGATGATGATACTTTTGGCAATAAGGTTGAGTTTGATGATTGCGATATAGATGATGAGATTGATCCTGatctaaaggaaaaaattgataGGGAGGTGGAAGATTTTGCCCGCAGATTGAATTCTGACTGGCCAGAAAGAATGCAAGAATTTTTATCATCAGGTCAAGAAAGGAAGACAATGCTTTTTTCTACCAACGGAAATGGATTTTTAAAGCCACATACCTTCTCTTTCGATGTACAGGACTTGCCTCGTGAACCCGTACAACCCAACCCCATCTA 1103 0.3581 MSEVDMAVIKPEMMKPYVWLQTSDGSIQQVEQEIAMFCPLICHEIIQKGTGTSKNHAICLPQRVSPAMLSLILDYCRFHQTPGRSNKERKSFDEKFIRMDTKRLCELTSAADSLQLKPLVDLTSRALARIIEGKTPEEIREIFHLPDDLTEEEKLEPLKNTTDDPRIRLLNRLYAKKRKELKERERLKNVEVEEEHVDERSVDDLLSFINGNEGDPKGIKTSKNKKKNRRKKDQQKNSSSKETSELNKKESNGHNIRYQSAEAARIGETSNLRDTDDDTFGNKVEFDDCDIDDEIDPDLKEKIDREVEDFARRLNSDWPERMQEFLSSGQERKTMLFSTNGNGFLKPHTFSFDVQDLPREPVQPNPI 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g01823 367 MobiDBLite consensus disorder prediction 235 252 - -
Bva08g01823 367 Coils Coil 170 190 - -
Bva08g01823 367 SUPERFAMILY POZ domain 16 80 IPR011333 -
Bva08g01823 367 MobiDBLite consensus disorder prediction 207 279 - -
Bva08g01823 367 Pfam Skp1 family, dimerisation domain 117 154 IPR016072 GO:0006511
Bva08g01823 367 PANTHER SKP1 1 282 IPR016897 GO:0006511
Bva08g01823 367 Pfam Skp1 family, tetramerisation domain 18 80 IPR016073 GO:0006511
Bva08g01823 367 PANTHER SKP1-LIKE PROTEIN 20 1 282 - -
Bva08g01823 367 SUPERFAMILY Skp1 dimerisation domain-like 90 160 IPR036296 GO:0006511
Bva08g01823 367 SMART skp1_3 15 116 IPR001232 GO:0006511
Bva08g01823 367 Gene3D Potassium Channel Kv1.1; Chain A 12 162 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g01823 Bva-Chr8 12311756 12318501 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g01823 - - gmx:100794666 546.584
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g01823 08 12311756 12318501 Bva08g01823 08 12311756 12318501 ECH
Bva02g01906 02 20604130 20609336 Bva08g01823 08 12311756 12318501 ECH