Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g01906 ATGCGGCATCAAAAGCACCAAAAGACTGGAGGGTTGCTACTGCCCAATGAAATTGAGGCCCAGAGAGATAATCATGAACAGTTAGCATGCTTTCTGTCTCTGCAATCCATTTTTCTGCGTTCGCAGATGCTTCAGCGCATGGATCATGAGCTTTTGGGTAGTGCTGCTGGGGAAGGCTGGATGTTATACCTGATGTCAGAAGTTGACATGGCAGTTATTAAACCTGAGATGATGAAGCCCTATGTCTGGCTTCATACTTCAGATGGTTCAATCCAAGAAGTGGAACAAGAAATTGCAATGTTTTGCCCTCTGATTTGTCatgaaataatacaaaaaggCGTGGGAACTTCTAAAAATCATGCCATATGTCTTCCTCAACGAGTTAGTCCTGCAATGTTGAGCTTAATTCTTGATTATTGTCGCTTTCATCAAACACCAGGTCGCTCTAACAAGGAACGGAAATCatttgatgaaaaattcaTTCGAATGGACACAAAGAGGCTCTGTGAGTTAACATCTGCTGCAGACAGTCTTCAATTAAAGCCTCTGGTCGATCTAACCAGTCGTGCACTTGCTCGAATAATTGAAGGAAAATCACCTGAGGAGATACGTGAGATATTTCATTTGCCTGATGATCTTACTGAGGAAGAGAAATTAGAGCCCTTAAAAAACACAACCGATGATCCACGTATCAGACTTTTGAACCGCTTGTATGCCAAGAAGAGGAAAGAACTAAAAGAACGTGAGAGATTAAAGaattttgaagttgaagaagagCAAGTAGATGAACGTTCTGTTGAGgatcttttgtcttttataaATGGGAATGATGGAGATCGAAAAGGGATTAAAACctccaagaataaaaagaagaatcggagaaaaaaagaacagaagAATCCTTCCTTAAAGGAAACCTCTGAAATCAATAAGgAGTCAGACGGTCATAACATCAGATACCACAGAGCTGAAGCCGCTGGAATTGGCGAGACATCTAATTTACGAGATACCGATGATGATACTTTTAGTGATAAGGTTGAGTTTGATGATTGTGACATAGATGATGAGATTGATCCTgctttaaaggaaaaaattgataGGGAGGTGGAAGATTTTGCCCGCAGATTGAATTCTGACTGGCCAGAGAGGATGCAAGAATTTTTATCGTCAGATCAAGAAAGGAAGACAATGCTTTTTTCGACCAACGGGAATGGATTTCTAAGGCGACATACCTGTATGGTTGCTTATTCCCTACCCTATGTTTA 1265 0.3739 MRHQKHQKTGGLLLPNEIEAQRDNHEQLACFLSLQSIFLRSQMLQRMDHELLGSAAGEGWMLYLMSEVDMAVIKPEMMKPYVWLHTSDGSIQEVEQEIAMFCPLICHEIIQKGVGTSKNHAICLPQRVSPAMLSLILDYCRFHQTPGRSNKERKSFDEKFIRMDTKRLCELTSAADSLQLKPLVDLTSRALARIIEGKSPEEIREIFHLPDDLTEEEKLEPLKNTTDDPRIRLLNRLYAKKRKELKERERLKNFEVEEEQVDERSVEDLLSFINGNDGDRKGIKTSKNKKKNRRKKEQKNPSLKETSEINKESDGHNIRYHRAEAAGIGETSNLRDTDDDTFSDKVEFDDCDIDDEIDPALKEKIDREVEDFARRLNSDWPERMQEFLSSDQERKTMLFSTNGNGFLRRHTCMVAYSLPYV 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g01906 421 MobiDBLite consensus disorder prediction 298 318 - -
Bva02g01906 421 Pfam Skp1 family, dimerisation domain 181 218 IPR016072 GO:0006511
Bva02g01906 421 Pfam Skp1 family, tetramerisation domain 82 144 IPR016073 GO:0006511
Bva02g01906 421 SMART skp1_3 79 180 IPR001232 GO:0006511
Bva02g01906 421 SUPERFAMILY POZ domain 80 144 IPR011333 -
Bva02g01906 421 SUPERFAMILY Skp1 dimerisation domain-like 154 224 IPR036296 GO:0006511
Bva02g01906 421 Gene3D Potassium Channel Kv1.1; Chain A 76 226 IPR011333 -
Bva02g01906 421 PANTHER SKP1-LIKE PROTEIN 20 65 335 - -
Bva02g01906 421 PANTHER SKP1 65 335 IPR016897 GO:0006511
Bva02g01906 421 MobiDBLite consensus disorder prediction 277 318 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g01906 Bva-Chr2 20604130 20609336 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g01906 - - gmx:100809439 540.036
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva02g01906 02 20604130 20609336 Bva02g01906 02 20604130 20609336 ECH
Bva02g01906 02 20604130 20609336 Bva08g01823 08 12311756 12318501 ECH