Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g01453 ATGGAGATGGGCTcttatgaagaaaaatataggaTAGGGGAGAATATGATTatgATAACACAGATTCTCTCTCcatctctcttctctcttccgtcatattcttcttctgtttGGTTCTCGAGAAAGTGTTGGAAGCTTCTCCCTAGCTCCTTGTCTCGTCTTTCCTCGTTCCTGAACCAGCTTTTTCTAGCCACAGCTTCAGCTCGCCGCCTTCACTCGCAAATGTCGACTCCTTCTAGGAAGAGATTGATGAGGGATTTTAAGAGATTGCAACAAGATCCTCCTGCTGGCATCAGTGGTGCGCCTCAAGACAATAATATTATGCTTTGGAATGCTGTTATCTTTGGGCCAGATGACACCCCATGGGATGGAGGTACGTTTAAGTTGACACTTCAGTTCACAGAGGATTATCCCAATAAACCACCTACAGTGCGCTTTGTGTCTCGAATGTTCCATCCGAACATTTATGCGGATGGAAGCATATGCTTGGACATTCTACAAAATCAATGGAGCCCTATTTATGATGTAGCTGCAATACTTACCTCAATCCAGTCGTTGCTGTGTGATCCAAACCCAAACTCACCGGCAAATTCCGAAGCTGCTCGGATGTTTAGCGAAAACAAGCGTGAATACAACAGAAGAGTACGTGAGATTGTTGAGCAGAGTTGGACTGCTGATTA 680 0.4118 MEMGSYEEKYRIGENMIMITQILSPSLFSLPSYSSSVWFSRKCWKLLPSSLSRLSSFLNQLFLATASARRLHSQMSTPSRKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQSWTAD 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g01453 226 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 78 224 IPR000608 -
Bva08g01453 226 SUPERFAMILY UBC-like 72 224 IPR016135 -
Bva08g01453 226 Pfam Ubiquitin-conjugating enzyme 82 218 IPR000608 -
Bva08g01453 226 ProSitePatterns Ubiquitin-conjugating (UBC) active site signature. 151 166 IPR023313 -
Bva08g01453 226 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 2 65 226 - -
Bva08g01453 226 SMART ubc_7 81 224 - -
Bva08g01453 226 CDD UBCc 81 219 IPR000608 -
Bva08g01453 226 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 65 226 - -
Bva08g01453 226 Gene3D Ubiquitin Conjugating Enzyme 56 225 IPR016135 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g01453 Bva-Chr8 7605893 7610756 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g01453 81 194 Miscellaneous Gene Families AT1G17280 31.092 4.02e-15 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g01453 K10573 - jre:108989809 320.087
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g01453 08 7605893 7610756 Bva11g01026 11 11891207 11895442 BWGD
Bva08g01453 08 7605893 7610756 Bva08g01453 08 7605893 7610756 ECH