Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g01275 ATGTATATTTCCATGGATTCCAAAAGACTTGCATTTTCGGAACCGTTAATATCGCAGAAAAGGAAGGTCATTTGTGGGTTTAGTTTGGGTGTTGGAgcttctcttattattttttctgtgcTTTTGTTCAATCATTCGCTTAACGTTCCCGAAGTTCACATTTTTCTGCAAGGATTTGAGGGTATTCATGCAAACTCTTCATTTGCTTCATTGCCCTTCTCATTTTCTCGTAatccttcctcttcttctgcGGTTGATCATACTGGTACGCAGAATCCTGTGAATTCTTTGCAGAGGAATCGAGAAGTGAGTTTACCAGCTGTACGATTAAATGACAACAGAACTCAACTGGAAAATTCCTCCCAGTATCGTGATAATAAAAACTTGCATGTTGAAGAACGGAATATTCGACAGAAAAGCCATGAAAGAGATGGTGCATTAGCGGCTGAACAGATAAATATCTCGCATTTTAATGGGCAAGGAATTGGTTCTGGGAAGACTGGTGGGGAGAATTCTTCTCAGTTGGTTAAAGATGCCAATTTGCTtggtgaagaaagaagaacaatTGACAATGCAAACCTTTCTGATGAGGCAAAGACGGTGAAACAGAAAACTATTGAAGGAGAGCTACCGAAGAATGCCGATTTTAGGACTAATAATGCGGCGGGAAATAACAATGCAGCAGGAAATTATGAAGGGAATTCcgttgagaaaaataaaaataatgtcacTGTTTTTTATGATGGttatcagaaaaagaaagagcagACTGATTTAAGAAACTGTGACATTTATGATGGAAAGTGGGTAAGAGATGATTCAAAGCCATATTATCCCCTCGGGTCTTGCCCCTATATCGATAGAGATTTTGATTGCCACCATAATGGAAGGCCGGATAGTGAATATGTGAAATGGAGATGGCAACCAAATGGATGCATCATTCCAAGTTTAAATGCAACTGATTTTCTGGAGAGGTTGAGAGGACAGAGGCTGGCTTTTGTAGGGGATTCATTGAACAGGAACATGTGGGAGTCCTTGGTGTGTCTCCTTCGTGAGAGCATCAAAGACAAGAGACGTGTTTATGAGATTTCTGGGAGGTCACAATTTAAGAAGAGAGGCTTCTATGCTTTCAGATTCGAGGACTATAATTGTTCAGTGGATTTTGTAAGTTCTCTATTCCTTGCACGAGAATCAACTTTCACCGGCAAAAATGGGACATTTGAGACATTAAGACTGGATATGATGGACCGGACAACCAGTATGTATTACGATTCTGATATCATTGTCTTTAACACAGGCCATTGGTGGACTCATGATAAAACATCTAGAGGAGAAGAATATTATCAAGAAGGCAACTATGTGCACCCGAGACTTAAGGTTCTGAAAGCATTTACGAGGGCTTTGACCACTTGGGCAAGGTGGATTGACGAAAACATTGACAGCAAAAGAAGCCTGGTGTTATTCAGAGGATATTCACCTGTCCACTTCAGTGGTGGGCAATGGAATTCGGGAGGACAGTGCCACAAAGAAAGTGAGCCAATATTCAATGAAACTTACTTGGAAAATTATCCCTCAAAAATGAGAGCCCTAGAATATGTcatcaaaacaatgaaaacacCAGTtctatatatgaatataagtAGGCTTACAGATTACAGAAAAGATGCGCATCCTTCAATCTACAGATTGGAATATCAGACAGAAGCAGAAAGAAATGCTGCTATTGAGGGATCTCAAGATTGCAGCCATTGGTGCTTGCCTGGAGTTCCAGATACTTGGAATGAATTGCTCTATGTTTCTCTCTTAAAACATGGAAAGGGCACTTGGAAAACTTG 1835 0.3744 MYISMDSKRLAFSEPLISQKRKVICGFSLGVGASLIIFSVLLFNHSLNVPEVHIFLQGFEGIHANSSFASLPFSFSRNPSSSSAVDHTGTQNPVNSLQRNREVSLPAVRLNDNRTQLENSSQYRDNKNLHVEERNIRQKSHERDGALAAEQINISHFNGQGIGSGKTGGENSSQLVKDANLLGEERRTIDNANLSDEAKTVKQKTIEGELPKNADFRTNNAAGNNNAAGNYEGNSVEKNKNNVTVFYDGYQKKKEQTDLRNCDIYDGKWVRDDSKPYYPLGSCPYIDRDFDCHHNGRPDSEYVKWRWQPNGCIIPSLNATDFLERLRGQRLAFVGDSLNRNMWESLVCLLRESIKDKRRVYEISGRSQFKKRGFYAFRFEDYNCSVDFVSSLFLARESTFTGKNGTFETLRLDMMDRTTSMYYDSDIIVFNTGHWWTHDKTSRGEEYYQEGNYVHPRLKVLKAFTRALTTWARWIDENIDSKRSLVLFRGYSPVHFSGGQWNSGGQCHKESEPIFNETYLENYPSKMRALEYVIKTMKTPVLYMNISRLTDYRKDAHPSIYRLEYQTEAERNAAIEGSQDCSHWCLPGVPDTWNELLYVSLLKHGKGTWKT 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g01275 611 MobiDBLite consensus disorder prediction 80 102 - -
Bva08g01275 611 Pfam PMR5 N terminal Domain 261 312 IPR025846 -
Bva08g01275 611 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 314 598 IPR026057 GO:0016740
Bva08g01275 611 MobiDBLite consensus disorder prediction 217 235 - -
Bva08g01275 611 MobiDBLite consensus disorder prediction 80 103 - -
Bva08g01275 611 MobiDBLite consensus disorder prediction 214 235 - -
Bva08g01275 611 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 16 608 IPR029962 GO:0016413
Bva08g01275 611 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 2 16 608 IPR029967 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g01275 Bva-Chr8 6669057 6673064 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g01275 - - pper:18793190 711.064
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g01275 08 6669057 6673064 Bva11g01167 11 12662282 12665029 BWGD
Bva05g00280 05 1368533 1371058 Bva08g01275 08 6669057 6673064 BWGD
Bva08g01275 08 6669057 6673064 Bva08g01275 08 6669057 6673064 ECH