Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00863 ATGTTCCTGGGTTTcatcctttttcttgttttcaaagGGATTTCGGGGGCTACATTTACACTTGTTAATAAGTGTGACTATACCATATGGCCTGGAATTTTAGGGAAACCAGACATCGGAAGCACAGGATTTGAGCTTAAAAAGGGAAACTCTCGCAGTTTCCAAGCCCCAACCGGTTGGTCCGGTAGATTCTGGGCCAGAACCGAATGCAAATTCGACGATTCAGGCCACGGTACTTGCGGCACCGGAGACTGCAGCTCCGGCTCCATCGATTGCAACGGCATCGGCGCAACTCCTCCAGCTACCCTTGCGGAATTCACTCTGGGCACTGGGTCGCAAGACTACTATGACGTGAGCCTGGTTGACGGGTACAATTTGCCAATGATGGTGGAAGCAAGCGGGGGATCAGGTGCATGCGCGAGCACCGGGTGTGTGGCGGATCTCAACCGGCGGTGTCCGTCGGAATTGAGGACCGACAGCGGCGATGCCTGCAAGAGTGCTTGTGGCGCGTTTGGAACACCAGAGTACTGCTGCAATGGTGCGTTTGGTTCCCCTTCCACGTGCAAACCCTCTATGTACTCCCAGATGTTCAAATCTGCGTGTCCAAAGTCTTACAGTTACGCTTATGACGATGCCACGAGTACCTTTACGTGTACAGGCGCCGATTACACCGTCacattttgtccttcttcttCCCCAATTCTGAAGTCTTCAACAGATTCCTCTCCAAAGCCAATAGGATCAACAACAGACGGATCCGGGTCGAACTCCCAGCCACCGGTGGAGCAGGCTGCACTTGCTACTACGTCATGGCTTGCGAATTTGGCAACAGGGGATTCAACCAGAATCCAACTTTGTGCAGCTGCATTGCTTGTGGCtcttaatttgattctttcccTTTTGGTGTACCTTTG 914 0.4956 MFLGFILFLVFKGISGATFTLVNKCDYTIWPGILGKPDIGSTGFELKKGNSRSFQAPTGWSGRFWARTECKFDDSGHGTCGTGDCSSGSIDCNGIGATPPATLAEFTLGTGSQDYYDVSLVDGYNLPMMVEASGGSGACASTGCVADLNRRCPSELRTDSGDACKSACGAFGTPEYCCNGAFGSPSTCKPSMYSQMFKSACPKSYSYAYDDATSTFTCTGADYTVTFCPSSSPILKSSTDSSPKPIGSTTDGSGSNSQPPVEQAALATTSWLANLATGDSTRIQLCAAALLVALNLILSLLVYL 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00863 304 SMART tha2 19 229 IPR001938 -
Bva08g00863 304 Pfam Thaumatin family 23 229 IPR001938 -
Bva08g00863 304 PANTHER OS03G0233200 PROTEIN 9 249 IPR001938 -
Bva08g00863 304 CDD TLP-PA 18 228 - -
Bva08g00863 304 PANTHER PATHOGENESIS-RELATED THAUMATIN SUPERFAMILY PROTEIN 9 249 - -
Bva08g00863 304 PRINTS Pathogenesis-related protein signature 42 51 IPR001938 -
Bva08g00863 304 PRINTS Pathogenesis-related protein signature 18 30 IPR001938 -
Bva08g00863 304 PRINTS Pathogenesis-related protein signature 219 228 IPR001938 -
Bva08g00863 304 PRINTS Pathogenesis-related protein signature 63 74 IPR001938 -
Bva08g00863 304 PRINTS Pathogenesis-related protein signature 114 130 IPR001938 -
Bva08g00863 304 ProSitePatterns Thaumatin family signature. 76 92 IPR017949 -
Bva08g00863 304 MobiDBLite consensus disorder prediction 234 260 - -
Bva08g00863 304 SUPERFAMILY Osmotin, thaumatin-like protein 17 230 IPR037176 -
Bva08g00863 304 ProSiteProfiles Thaumatin family profile. 16 229 IPR001938 -
Bva08g00863 304 Gene3D Thaumatin 17 229 IPR037176 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00863 Bva-Chr8 4439822 4441759 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g00863 1 230 Receptor kinase-like Gene Family AT5G38280 47.325 4.10e-73 236
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00863 - - gmx:100815652 439.884
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00863 08 4439822 4441759 Bva08g00863 08 4439822 4441759 ECH
Bva13g01576 13 9403197 9404948 Bva08g00863 08 4439822 4441759 ECH
Bva14g02318 14 19991707 19993615 Bva08g00863 08 4439822 4441759 ECH