Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00213 ATGGGTGTCGCATTTTCGTCCTCGCACGCAGACCAAAATGGCTCTCGGATTGTACCATGCAAATCTACTTTGGGGGAATTACCAGAGGGCTGCGTGGCTTTGATTCTCGAATATATGGATCCTCCGCAGATTTGTAAACTAGCTAGTATGAACCGTACTTTTCGTGGTGCGTCCTGGGCAGATTTTGTGTGGGAATCCAAGTTGCCCCCCAATTACGATCTTCTTGTGAAAAAAATCTCCGATGATTCTGCGATAGATTTGGGCAAGAGAGGACTTTATGCTAGACTGTGCCGACTAAATACTTTCGATGGAGGTACCAAGAAATTCTGGCTGGACAGGAGCACCGGTAAACTTTGTTTATCCATATCATCCAAGGGACTATCTATAACGGGAATTGATGATCGAAGATATTGGAATCATATCCCTACCGAAGAATCTAGATTTGGTAGTGTGGCATATCTACAGCAAATCTGGTGGTTTGAAGTTGATGGAGAAGTTGAGTTCCCATTTCCAGCAGGAACATATAGCATATTCTTCAGAATACATCTAGGACGAGCCTACAAGAGATTTGGACGACGAGTCTGCAATACTGAGAATGTTCATGGGTGGGATATAAAGCCTGTAAGATTCCAGCTATGGACTTCAGATGGGCAATACGTTGCTTCCCAGAGTTTTCTTAAAGGAGCTGGGGAATGGAGTTATTACCATGCAGGGAATTTTATGGTTGGCAATGGCAATGCATCAACAAAAGTTAAATTCTCAATGACTCAAATTGATTGCACCCACACCAAAGGTGGCCTCTGTTTAGATTCTGTGCTAATATATCCAACTGAATTCCGAAACGTTAAAGCATTTTTAAATCGTTCTTA 869 0.4258 MGVAFSSSHADQNGSRIVPCKSTLGELPEGCVALILEYMDPPQICKLASMNRTFRGASWADFVWESKLPPNYDLLVKKISDDSAIDLGKRGLYARLCRLNTFDGGTKKFWLDRSTGKLCLSISSKGLSITGIDDRRYWNHIPTEESRFGSVAYLQQIWWFEVDGEVEFPFPAGTYSIFFRIHLGRAYKRFGRRVCNTENVHGWDIKPVRFQLWTSDGQYVASQSFLKGAGEWSYYHAGNFMVGNGNASTKVKFSMTQIDCTHTKGGLCLDSVLIYPTEFRNVKAFLNRS 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00213 289 Pfam Phloem protein 2 118 276 IPR025886 -
Bva08g00213 289 ProSiteProfiles F-box domain profile. 21 67 IPR001810 GO:0005515
Bva08g00213 289 PANTHER F-BOX PROTEIN PP2-A15 1 284 - -
Bva08g00213 289 SUPERFAMILY F-box domain 19 98 IPR036047 GO:0005515
Bva08g00213 289 PANTHER F-BOX PROTEIN PP2-A12 1 284 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00213 Bva-Chr8 1032567 1035091 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00213 - - gmx:100788842 474.937
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00213 08 1032567 1035091 Bva08g00213 08 1032567 1035091 ECH
Bva08g00213 08 1032567 1035091 Bva02g01818 02 20185224 20187582 ECH