Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g01818 ATGGGTGCTAGTTTTTCTGGGTGCGTTTCGGATTCCGGTGGACCTTTGCAGCCAAGACTTGACGATATACCTGAGAGTTGTGTCGCGTTAGTGTTAATGTACTTGGATCCTCCAGATATATGCAAACTAGCTCGATTGAACAGGGCATTTCGTGGTGCTTCATTAGCAGATTTCATCTGGGAATCGAAATTGCCTTCTACTTACAAGTTTATCATGGAGAAAGTGCTGGAGGATCCTTCTGTAATGGTTCTGGGAAAGAAGGATCTTTATGCAAGACTCTGTAGGCGTAGTCCATTTGATAGCGGAACAAAGGAATTTTGGCTGGATAAGAGGACGGGTGGGATTTGTTTAGCTATTTCTTGTAAAGGATTAAAAATTACTGGAATAGATGATCGGAGATATTGGAATTACATTTCCACTGATGAATCAAGATTCCAGACAGTTGCTTATCTCCAACAGATTTGGTGGCTGGAAGTGGAGGGAGATATAGATTTCCAGTTTCCATCTGGGCAATATAGTGTGTACTTCAGACTTCATCTTGGCAAGTCATCGAAGAGGCTGGGTCGTCGAGTTTGTAACACAGATCACATCCATGGATGGGACATAAAACCTGTAAGGTTTCAGCTGACAACTTCTGATGGTCAACACGCAGTATCCCAGTGTTATTTGGATAGTCCAGGGAACTGGGCAGTCTATTATGTAGGAAATTTCATCTCCAACAACTCCAATGATTTGATGAAgatcaaattttcattaactCAAATCGACTGCACGCACATCAAAGGAGGTTTGTGTGTAGATTCTGTGTTCATATGCAGCAGTGAGATTGGAAGCAAGGAGTTTGAATA 848 0.4151 MGASFSGCVSDSGGPLQPRLDDIPESCVALVLMYLDPPDICKLARLNRAFRGASLADFIWESKLPSTYKFIMEKVLEDPSVMVLGKKDLYARLCRRSPFDSGTKEFWLDKRTGGICLAISCKGLKITGIDDRRYWNYISTDESRFQTVAYLQQIWWLEVEGDIDFQFPSGQYSVYFRLHLGKSSKRLGRRVCNTDHIHGWDIKPVRFQLTTSDGQHAVSQCYLDSPGNWAVYYVGNFISNNSNDLMKIKFSLTQIDCTHIKGGLCVDSVFICSSEIGSKEFE 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g01818 282 PANTHER F-BOX PROTEIN PP2-A15 1 279 - -
Bva02g01818 282 ProSiteProfiles F-box domain profile. 17 63 IPR001810 GO:0005515
Bva02g01818 282 Pfam Phloem protein 2 115 272 IPR025886 -
Bva02g01818 282 SUPERFAMILY F-box domain 18 93 IPR036047 GO:0005515
Bva02g01818 282 PANTHER F-BOX PROTEIN PP2-A13 1 279 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g01818 Bva-Chr2 20185224 20187582 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g01818 - - gmx:100814033 464.536
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva02g01818 02 20185224 20187582 Bva02g01818 02 20185224 20187582 ECH
Bva08g00213 08 1032567 1035091 Bva02g01818 02 20185224 20187582 ECH
Bva11g02076 11 17342405 17345195 Bva02g01818 02 20185224 20187582 ECH