Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00172 ATGCTTTCTTGTTCATCGCGAATCTTATTCGGCATTTCATTGCATAGTAATCCAATTAAAGCAGGGTCTTCAAGCCCCTTGTCTTTGTCATTCACTTTGAGAACAGATCACACAATGGCTAGCGCATCAAATCATGCTTCAGTCCATGATTTCACTGTTAAAGATGCCAGGGGAAAAGATGTCAATCTCGCCGATTACAAGGGAAAGGTCCTTCTAATTGTCAATGTGGCTTCGCAATGTGGCTTGACTAATTCAAACTACACAGAACTGAGCCAGTTGTacgagaaatataaaaatcaagGTCTGGAGATTCTGGCATTTCCGTGCAATCAGTTTGGGGCACAGGAGCCTGGATCCAATGAACAGATCTTAGAGTTTGCTTGTACTCGCTTTAAGGCAGAGTATCCCATCTTTGACAAGGTTGATGTGAATGGTGACAATGCTGCTCCACTTTACAAGTttctaaaatcaaacaaaggtGGGATCTTTGGGGATAATATCAAGTGGAACTTCTCCAAATTCCTTGTTGATAAGGATGGCAACATTGTTGATCGTTATGCACCCACAACTTCCCCTCTTAGCATTGAGAAGGACATAAAGAAACTGCTGGGGGTCGCATG 620 0.4065 MLSCSSRILFGISLHSNPIKAGSSSPLSLSFTLRTDHTMASASNHASVHDFTVKDARGKDVNLADYKGKVLLIVNVASQCGLTNSNYTELSQLYEKYKNQGLEILAFPCNQFGAQEPGSNEQILEFACTRFKAEYPIFDKVDVNGDNAAPLYKFLKSNKGGIFGDNIKWNFSKFLVDKDGNIVDRYAPTTSPLSIEKDIKKLLGVA 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00172 206 PANTHER GLUTATHIONE PEROXIDASE 22 203 - -
Bva08g00172 206 Pfam Glutathione peroxidase 48 156 IPR000889 GO:0004602|GO:0006979
Bva08g00172 206 PRINTS Glutathione peroxidase family signature 167 176 IPR000889 GO:0004602|GO:0006979
Bva08g00172 206 PRINTS Glutathione peroxidase family signature 66 83 IPR000889 GO:0004602|GO:0006979
Bva08g00172 206 PRINTS Glutathione peroxidase family signature 102 118 IPR000889 GO:0004602|GO:0006979
Bva08g00172 206 ProSiteProfiles Thioredoxin domain profile. 42 204 IPR013766 -
Bva08g00172 206 ProSiteProfiles Glutathione peroxidase profile. 38 206 IPR000889 GO:0004602|GO:0006979
Bva08g00172 206 ProSitePatterns Glutathione peroxidases active site. 68 83 IPR029759 -
Bva08g00172 206 SUPERFAMILY Thioredoxin-like 47 203 IPR036249 -
Bva08g00172 206 Gene3D Glutaredoxin 39 204 - -
Bva08g00172 206 PIRSF Glutathion_perox 23 205 IPR000889 GO:0004602|GO:0006979
Bva08g00172 206 PANTHER GLUTATHIONE PEROXIDASE 22 203 IPR000889 GO:0004602|GO:0006979
Bva08g00172 206 CDD GSH_Peroxidase 47 199 IPR000889 GO:0004602|GO:0006979
Bva08g00172 206 ProSitePatterns Glutathione peroxidases signature 2. 105 112 IPR029760 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00172 Bva-Chr8 849836 852544 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00172 K00432 - twl:119980989 322.013
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00172 08 849836 852544 Bva08g00171 08 846927 849217 BWGD
Bva08g00172 08 849836 852544 Bva08g00172 08 849836 852544 ECH