Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00171 ATGACAAGCGAACCACCCAAGGATCCAAAATCCGTGTACGATTTCGTTGTCAAGGATGCTGAGGGCAACGACATTGATCTTAGCATTTACAGGGGAAAAGTCTTACTCATAGTCAATGTTGCTTCCAAATGCGGCATGACCAACTCAAATTATACAGAGCTGAATCAATTATATGAGAAATACAAAGATAAAGGCCTGGAGATACTGGCGTTTCCATGCAACCAGTTTGGTGAAGAGGAACCTGGAAGCAATGATCAAATTGCGCAGTTTGTCTGTAGGCGCTTCAAATCAGAATTTCCCATCTTTTATAAGATTGAAGTAAATGGTGACCATGCTATTCCGCTCTACAAATTCTTGAAGTCAGGGAAATGGGGAATTTTTGGGGATGATATACAGTGGAATTTTGCCAAGTTTCTAGTTGACAAGGATGGGCAAGCAGTAGATCGTTATTATCCCACGACTTCTCCCCTTAGCCTTGAGTTCAACATAAAGAAGCTACTGGGCATCTCGTGGATGTG 518 0.4208 MTSEPPKDPKSVYDFVVKDAEGNDIDLSIYRGKVLLIVNVASKCGMTNSNYTELNQLYEKYKDKGLEILAFPCNQFGEEEPGSNDQIAQFVCRRFKSEFPIFYKIEVNGDHAIPLYKFLKSGKWGIFGDDIQWNFAKFLVDKDGQAVDRYYPTTSPLSLEFNIKKLLGISWM 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00171 172 ProSitePatterns Glutathione peroxidases active site. 32 47 IPR029759 -
Bva08g00171 172 ProSiteProfiles Glutathione peroxidase profile. 2 172 IPR000889 GO:0004602|GO:0006979
Bva08g00171 172 PIRSF Glutathion_perox 1 169 IPR000889 GO:0004602|GO:0006979
Bva08g00171 172 ProSiteProfiles Thioredoxin domain profile. 6 168 IPR013766 -
Bva08g00171 172 Gene3D Glutaredoxin 3 170 - -
Bva08g00171 172 PRINTS Glutathione peroxidase family signature 30 47 IPR000889 GO:0004602|GO:0006979
Bva08g00171 172 PRINTS Glutathione peroxidase family signature 66 82 IPR000889 GO:0004602|GO:0006979
Bva08g00171 172 PRINTS Glutathione peroxidase family signature 131 140 IPR000889 GO:0004602|GO:0006979
Bva08g00171 172 SUPERFAMILY Thioredoxin-like 11 167 IPR036249 -
Bva08g00171 172 ProSitePatterns Glutathione peroxidases signature 2. 69 76 IPR029760 -
Bva08g00171 172 PANTHER GLUTATHIONE PEROXIDASE 8-RELATED 1 169 - -
Bva08g00171 172 Pfam Glutathione peroxidase 12 120 IPR000889 GO:0004602|GO:0006979
Bva08g00171 172 CDD GSH_Peroxidase 11 163 IPR000889 GO:0004602|GO:0006979
Bva08g00171 172 PANTHER GLUTATHIONE PEROXIDASE 1 169 IPR000889 GO:0004602|GO:0006979
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00171 Bva-Chr8 846927 849217 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00171 K00432 - qsu:112038135 302.367
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00172 08 849836 852544 Bva08g00171 08 846927 849217 BWGD
Bva08g00171 08 846927 849217 Bva08g00171 08 846927 849217 ECH