Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00101 ATGGCTGAGCATCACGAACACGAAGAATCCAAGGCTGAATCCTTGATGGAGAAGATATCGGAGAAGATTCACGACCACGATTCTTCGTCTTCATCTAATTCAGACAACGAGAAGAGCAGCTCGTCTCCTTCCATCAAGTCCAagattttcagaattttcGGAAGGGAAAAACCCGTTCACAAGGTCCTTGGTGGGGGAAAACCGGCGGATGTCTTCCTCTGGAGGAATAAGAAGATATCAGGTTCCGTGCTTGGTGTTGCGACTGCTATTTGGGTTCTGTTTGAATTGATTGAATACCACCTGCTCACTCTCATTTGCCACCTGCTGATACTTGCATTGGCAGTATTGTTCTTGTGGTCCAATGCGTCCACTTTTATTAACAAGACCCCCCACGGATCCCTGAGGGATCTCAAGAAGTTTCTCTCTGTGATCGCTGGATTATGGGTTTTCTCTATTATCGGGGGTTGGTTCAATTTCCTGACTTTGTTCTACATAGCCTTTGTTTTGCTTCACGCTGTGCCCGTACTCTATGAGAAATATGAAGATCAGGTGGACTCGTTTGCTGAGAAGGCAACAATTGAGATTAAGAAGCAGTATGCAGTGTTGGACGCGAAGGTCTTGAGTAAGATTCCCCGCGGACCGTTGAAAGATAGCAAAAAAGACTG 665 0.4511 MAEHHEHEESKAESLMEKISEKIHDHDSSSSSNSDNEKSSSSPSIKSKIFRIFGREKPVHKVLGGGKPADVFLWRNKKISGSVLGVATAIWVLFELIEYHLLTLICHLLILALAVLFLWSNASTFINKTPHGSLRDLKKFLSVIAGLWVFSIIGGWFNFLTLFYIAFVLLHAVPVLYEKYEDQVDSFAEKATIEIKKQYAVLDAKVLSKIPRGPLKDSKKD 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00101 221 PANTHER RETICULON 1 130 IPR045064 GO:0009617
Bva08g00101 221 PANTHER RETICULON 133 220 IPR045064 GO:0009617
Bva08g00101 221 MobiDBLite consensus disorder prediction 22 43 - -
Bva08g00101 221 ProSiteProfiles Reticulon domain profile. 68 221 IPR003388 -
Bva08g00101 221 PANTHER RETICULON-LIKE PROTEIN 1 130 - -
Bva08g00101 221 Pfam Reticulon 135 191 IPR003388 -
Bva08g00101 221 Pfam Reticulon 69 130 IPR003388 -
Bva08g00101 221 PANTHER RETICULON-LIKE PROTEIN 133 220 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00101 Bva-Chr8 512962 515016 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00101 - - gmx:100811024 293.123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00101 08 512962 515016 Bva08g00101 08 512962 515016 ECH
Bva08g00101 08 512962 515016 Bva12g01988 12 15739152 15744876 ECH