Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g02495 ATGGCGTCTCAAGCAAGCCTTCTCCTTCAAAAGCAGCTCAAAGATCTTTGCAAGAACCCCGTCGACGGGTTCTCCGCCGGTTTGGTAGACgaaaacaacatatttgaaTGGAGTGTCACCGTAATTGGACCTCCCGATACTCTTTATGAGGGGGGATTTTTCAATGCCATTATGAGTTTCCCATCCAATTACCCAAATAGTCCACCAACAGTGAAATTCGCCTCAGATATATGGCATCCCAAcgTATATCCTGATGGGCGGGTTTGCATATCAATTCTTCACCCTCCTGGTGAGGATCCAAATGGTTACGAGCTTGCAAGTGAGCGCTGGACGCCTGTTCATACAGTAGAGAGTATAGTATTGAGTATCATATCGATGCTTTCAAGTCCTAATGATGAATCTCCAGCAAATGTCGAAGCTGCTAAGGAGTGGAGAGATAGGAGAGATGATTTCAAGAAAAAGGTGCCAAGTCAAGTCTCGTCTTCTGCTGAATATTGTGATTCTGGTTCTTGGGAACACAATAAAGCATTGCAATTTAATTTCAGAGAAATTTACCTGCCATCAGTTTATATGGGAGACACGTTGGATTATTCTAACTCgagcaaaagaaataaaccaaTCAGTGCCATCACTGggaaaaaagtatataataggTCATTGATTGCATCTCGCCCTAAAGGATTTGCGCAGAGAAATTTCGAACATCTTGTTTCACTGAGCCAAAGTGGTTTTGGAAGTAGTACTGTGGGtcatttcacttttttcttgcttaaagTTGCTGCATTGGAGACTGTTAGGAGGTTCTCTAAAAACAGGTGTCCATATGCCTGGCGAGGGATTCAGGCTTTGCAAATTCTTTGTTATCCACCATTTAAATGGATTCAGAGATGGGCTCCTTTCAAGTGCTTGATCAAAAGCATGCAGGTCCTATCAAGGCCACTACTAGTACTTTCAATTGCAACAGCTTTTTCTGATCAATCAGAGTGCAGTGAGGGAACCTCAGATTGTGTTACCGATTCCCGTGATTCAGAAGTATGCTCGGAACAATCTCCTGGGCATTCCAATTTGAGTGCAAGTCACTCTGAGGTATCtcctaaaattttagagtCCGAAAGCTGGTTGATTCAACTCTACAAGGAGCTGGAAAATCAAGAGATTGACTTGCCAGAAAGAATCAATGAGGATGAGCTTCGCAGATTTTATATGGCTTCTAATAATGATTTTTCGTGCTTCCTTGCCTCAATTAAGAAGACAATTCGCTGGAGGGAGAGTTATAGAATTCTTCTAAGTGAAGAACTGGAAATGTGGTCAAATCTGGTATTCTGGCATGGATCTGATGTGATGCATAGACCTTGCCTCTTTGTAAGGCTTGGCCTAGCTTGCCGCACATTGGCATCACAAGATAAACCTCGATTTGCTCAGGCAGTCATATCGCAGGTAGAGTATGGAGTTTTGCATTTGGTTGATGCAGAGAATCCTCATATTACAGTGTTGGTGGACTGTGAAGGGTTAACTACATTTAAAATTCCCATCCACATGATGAGATCTTGTTCTTCCCTTCTGCAAGATCATTATCCTAATCGTCTTGGTTGTTTGTTTGTCATACGACTTCCAGCAGTTGTTTGTCATTTTGCCCAGTCTGTGACTCAGGTTTTGAAGCCTCTTACTCgggaaaagttaaaaatactGGGACAGGGGTACCAGAAGGTTCTTCATGAGTATCTGCAAACACTGCCATCTTATCTCGGAGGCAGCTGCACTTGCATGAAATGTTCCAGAATTGGCATCTCGGGTATGCGGCGACCTCTTGAAGCTGGGACTAGCAGTACCAGGATAGATAGGGAGGCGGATGTCAGTGACAGTGAGGATTCTTCGTCGTCTCATTCATCCGGTGAATTAGACTTGCATAGTGGTAAATATGACAAGCTGCTGAGAACTGCTATAATAAGCATTCTCATATTATGGGTTTTTGTAGCTCTTGTTGTTGGAATGTATGACCCTGCCAGTCGTCGTTTGCCCCTGTG 2024 0.4135 MASQASLLLQKQLKDLCKNPVDGFSAGLVDENNIFEWSVTVIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFASDIWHPNVYPDGRVCISILHPPGEDPNGYELASERWTPVHTVESIVLSIISMLSSPNDESPANVEAAKEWRDRRDDFKKKVPSQVSSSAEYCDSGSWEHNKALQFNFREIYLPSVYMGDTLDYSNSSKRNKPISAITGKKVYNRSLIASRPKGFAQRNFEHLVSLSQSGFGSSTVGHFTFFLLKVAALETVRRFSKNRCPYAWRGIQALQILCYPPFKWIQRWAPFKCLIKSMQVLSRPLLVLSIATAFSDQSECSEGTSDCVTDSRDSEVCSEQSPGHSNLSASHSEVSPKILESESWLIQLYKELENQEIDLPERINEDELRRFYMASNNDFSCFLASIKKTIRWRESYRILLSEELEMWSNLVFWHGSDVMHRPCLFVRLGLACRTLASQDKPRFAQAVISQVEYGVLHLVDAENPHITVLVDCEGLTTFKIPIHMMRSCSSLLQDHYPNRLGCLFVIRLPAVVCHFAQSVTQVLKPLTREKLKILGQGYQKVLHEYLQTLPSYLGGSCTCMKCSRIGISGMRRPLEAGTSSTRIDREADVSDSEDSSSSHSSGELDLHSGKYDKLLRTAIISILILWVFVALVVGMYDPASRRLPL 674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g02495 674 Pfam CRAL/TRIO domain 439 584 IPR001251 -
Bva07g02495 674 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 442 590 IPR001251 -
Bva07g02495 674 MobiDBLite consensus disorder prediction 605 634 - -
Bva07g02495 674 SUPERFAMILY CRAL/TRIO domain 436 589 IPR036865 -
Bva07g02495 674 CDD UBCc 17 159 IPR000608 -
Bva07g02495 674 CDD SEC14 431 584 IPR001251 -
Bva07g02495 674 Gene3D Ubiquitin Conjugating Enzyme 2 171 IPR016135 -
Bva07g02495 674 Gene3D - 368 616 IPR036865 -
Bva07g02495 674 SMART sec14_4 434 587 IPR001251 -
Bva07g02495 674 SMART ubc_7 7 164 - -
Bva07g02495 674 MobiDBLite consensus disorder prediction 340 359 - -
Bva07g02495 674 MobiDBLite consensus disorder prediction 607 622 - -
Bva07g02495 674 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 4 164 IPR000608 -
Bva07g02495 674 MobiDBLite consensus disorder prediction 343 359 - -
Bva07g02495 674 Pfam Ubiquitin-conjugating enzyme 9 155 IPR000608 -
Bva07g02495 674 ProSitePatterns Ubiquitin-conjugating (UBC) active site signature. 78 93 IPR023313 -
Bva07g02495 674 PANTHER SEC14 CYTOSOLIC FACTOR FAMILY PROTEIN / PHOSPHOGLYCERIDE TRANSFER FAMILY PROTEIN 198 669 - -
Bva07g02495 674 SUPERFAMILY UBC-like 3 162 IPR016135 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g02495 Bva-Chr7 20004672 20014119 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g02495 11 131 Miscellaneous Gene Families AT3G17000 31.538 7.42e-12 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g02495 - - gmx:100814843 642.884
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva07g02495 07 20004672 20014119 Bva07g02495 07 20004672 20014119 ECH
Bva07g02495 07 20004672 20014119 Bva03g00771 03 4614856 4618995 ECH