Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g00771 atgGCTGCGTCGCAAGCAAGCCTTCTCCTCCAAAAGCAACTCAGAGATCTTTGTAAAACTCCCGTGGATGGGTTTTCGGCTGGTTTGGTTGATGAGAGCAACGTATTCGAATGGAGGGTCACCATTATTGGCCCTCCCGATACTCTCTATGAAGGAGGTTTCTTCAATGCCATCATGAGCTTTCCTTCCAATTATCCAAACAGCCCACCTACAGTGAGATTTACATCAGAGATGTGGCATCCTAATGTTTACACGGATGGAAAAGTCTGCATTTCCATTTTGCATCCTCCTGGTGATGATCCAAGTGGCTATGAACTTGCAAGTGAGCGTTGGAGTCCTGTCCATACCGTTGAGAGCATAGTTTTGAGTATAATATCAATGCTTTCAAGCCCTAATGATGAGTCTCCTGCAAATGTGGAGGCGGCGAAAGAAtggagagaaagaagggatGATTTCAGAAAGAAGGTTAGCCGTTGCGTGAGGAAATCTCAAGAAATGTTATG 503 0.4334 MAASQASLLLQKQLRDLCKTPVDGFSAGLVDESNVFEWRVTIIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVRFTSEMWHPNVYTDGKVCISILHPPGDDPSGYELASERWSPVHTVESIVLSIISMLSSPNDESPANVEAAKEWRERRDDFRKKVSRCVRKSQEML 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g00771 167 ProSitePatterns Ubiquitin-conjugating (UBC) active site signature. 79 94 IPR023313 -
Bva03g00771 167 CDD UBCc 9 160 IPR000608 -
Bva03g00771 167 Gene3D Ubiquitin Conjugating Enzyme 2 167 IPR016135 -
Bva03g00771 167 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 5 165 IPR000608 -
Bva03g00771 167 PANTHER ENZYME E2 G, PUTATIVE-RELATED 2 167 - -
Bva03g00771 167 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 2 167 - -
Bva03g00771 167 SMART ubc_7 8 165 - -
Bva03g00771 167 SUPERFAMILY UBC-like 4 163 IPR016135 -
Bva03g00771 167 Pfam Ubiquitin-conjugating enzyme 10 159 IPR000608 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g00771 Bva-Chr3 4614856 4618995 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g00771 12 132 Miscellaneous Gene Families AT3G17000 30.952 2.14e-13 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g00771 K10575 - fve:101292976 316.235
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva07g02495 07 20004672 20014119 Bva03g00771 03 4614856 4618995 ECH
Bva03g00771 03 4614856 4618995 Bva03g00771 03 4614856 4618995 ECH