Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g02464 ATGATTTTTGAAGACTTCTATTTGCTGGGCACCAGAATACGCTCTTTGGCTCAGACCCTTAGCACTTTCTCTATCGCTGATCTGCTCCTCAGGTTGTTGCTGAGACCTTCTGAAATTCTTGCAATGTCGGGGTTACTCAATTCTTCTCTGAACGGTTCTGCTTCAAATATTCCAGATGGTACTGGGTGGTCTTATGCTACATCATTCTCTGGTCAGTCTGGTGCAGCGTCCCCTGTTTTTCATCACACTGGATCCATTCAGGGGTTGCACAATATTCATGGGAACTTTAATGTTCCCAACATGCCAGGTGCTTTGACATCAAGAAATTCAACATTAAACAGTGTTCCATCTGGAGGGGTTCAACAACCTACTGGCAACCTTTCTAGCGGAAgattttcatcaaataatcTTCCTGTCGCCCTTTCACAGTTATCTCATGGCAGCTCCCATGGACATTCAGGAGTCACAAATAGAGGAGGATTGGGAGTATCCCCAATTTTGGGAAATGCAGGTCCTCGAATTACAAGTTCTATGGGAAACATGGTTGGTGGGGGGAACATTGGGAGGAGTATAAGCTCTGGCGGAGGACTGTCAGTCCCTGGTCTTACTTCTCGTCTAAATTTGAGTGGCAACAGTGGATCTGGTGGTTTAAGTGTGCAAGGACAGAATCGTTTGATGAGTGGGGTGCTTCCGCAAGGATCTCCACAGGTAATTTCAATGCTAGGAAATTCCTATCCTAGTGCCGGAGGTCCACTTTCTCAAAGTCATGTTCAAGCGTTGACAAGTCGACCTAGTTCTGCTGGGGGATCTCAAGGACAGTTAGgttCACTACGGAAGCAGGGTATTGGCGTTAGTCCCATAGTTCAACAAAACCAAGAGTTTAGCATCCAGAATGAAGATTTCCCTGCTTTACCGGGATTTAAAGGTGGTAATGCAGATTATACTATGGATATGCATCAGAAGGAACAACTTCATGACAACGCCGTGTCTGTGATGCAATCTCCACATTTCTCTATGGGGAGGTCTGCTGGATTCAGCTTGGGGGGAACATATTCATCACATCGTCCACAGCAACAGCAACAACATGCTCCCTCAGTCAGCAGTGGTGTCTCCTTTTCATCTGTAAACAATCAGGAGCTTCTCCATCTACATGGCTCGGATATGTTTCCGTCATCACATTCAACTTATCATTCACAGACCAGTGGACCTCCTGGCATTGGATTGAGGCCTTTAAATTCTCCAAGTACTGTTTCTGGTATGGGTTCATATGATCAGCTTATTCAGCAGTATCAACAGCACCAAAACCAGTCTCAGTTTCGTCTTCAACAAATGTCAGCCGTTAATCAGTCTTTTAGAGATCAGGGCATGAAGTCAATGCAATCTGCACAATCAACTCCTGATCCATTTGGTTTGCTTGGCTTGTTAAGTGTGATCAGGATGAGTGATCCTGATCTGACATCTCTTGCACTTGGTATTGATCTTACGACGCTTGGTTTAAATTTGAACTCTTCGGAAAATCTTCACAAGACTTTTGGGTCTCCATGGTCTGACGAATCAGCTAAGGGTGATCCAGAGTTTAATGTTCCCCAATGTTATCATGCTAAACAGCCACCTGCCTTACATCAGCAAGGTTATTTCACCAAGTTTACGGTGGAAacattattttacatattttacaGCATGCCCAAAGACGAGGCACAAGTATACGCTGCGAATGAGCTTTACAATAGAGGCTGGTTTTATCACAAAGAGCATCGTTTGTGGTTCGTAAGAGTGCCCAACATGGAGCCGCTTGTTAAAACTAGCACATACGAGAGAGGATATTATCATTGTTTTGATCCGAACACATTTGAAACGATTCGCAAGGATAATTTTGTTCTCTATTATGAAATGTTGGAAAAGAGACCAACTTTGCCTCAACATTG 1925 0.4348 MIFEDFYLLGTRIRSLAQTLSTFSIADLLLRLLLRPSEILAMSGLLNSSLNGSASNIPDGTGWSYATSFSGQSGAASPVFHHTGSIQGLHNIHGNFNVPNMPGALTSRNSTLNSVPSGGVQQPTGNLSSGRFSSNNLPVALSQLSHGSSHGHSGVTNRGGLGVSPILGNAGPRITSSMGNMVGGGNIGRSISSGGGLSVPGLTSRLNLSGNSGSGGLSVQGQNRLMSGVLPQGSPQVISMLGNSYPSAGGPLSQSHVQALTSRPSSAGGSQGQLGSLRKQGIGVSPIVQQNQEFSIQNEDFPALPGFKGGNADYTMDMHQKEQLHDNAVSVMQSPHFSMGRSAGFSLGGTYSSHRPQQQQQHAPSVSSGVSFSSVNNQELLHLHGSDMFPSSHSTYHSQTSGPPGIGLRPLNSPSTVSGMGSYDQLIQQYQQHQNQSQFRLQQMSAVNQSFRDQGMKSMQSAQSTPDPFGLLGLLSVIRMSDPDLTSLALGIDLTTLGLNLNSSENLHKTFGSPWSDESAKGDPEFNVPQCYHAKQPPALHQQGYFTKFTVETLFYIFYSMPKDEAQVYAANELYNRGWFYHKEHRLWFVRVPNMEPLVKTSTYERGYYHCFDPNTFETIRKDNFVLYYEMLEKRPTLPQH 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g02464 641 MobiDBLite consensus disorder prediction 249 277 - -
Bva07g02464 641 Pfam NOT2 / NOT3 / NOT5 family 509 632 IPR007282 GO:0006355
Bva07g02464 641 PANTHER CCR4 NOT-RELATED 161 261 IPR040168 GO:0030015
Bva07g02464 641 Gene3D - 459 641 IPR038635 -
Bva07g02464 641 PANTHER NOT TRANSCRIPTION COMPLEX SUBUNIT VIP2 ISOFORM X1-RELATED 161 261 - -
Bva07g02464 641 PANTHER CCR4 NOT-RELATED 43 163 IPR040168 GO:0030015
Bva07g02464 641 MobiDBLite consensus disorder prediction 144 163 - -
Bva07g02464 641 MobiDBLite consensus disorder prediction 344 371 - -
Bva07g02464 641 PANTHER NOT TRANSCRIPTION COMPLEX SUBUNIT VIP2 ISOFORM X1-RELATED 43 163 - -
Bva07g02464 641 PANTHER NOT TRANSCRIPTION COMPLEX SUBUNIT VIP2 ISOFORM X1-RELATED 260 641 - -
Bva07g02464 641 MobiDBLite consensus disorder prediction 388 407 - -
Bva07g02464 641 MobiDBLite consensus disorder prediction 385 407 - -
Bva07g02464 641 PANTHER CCR4 NOT-RELATED 260 641 IPR040168 GO:0030015
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g02464 Bva-Chr7 19848426 19855654 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g02464 K12605 - pvy:116109088 996.112
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00178 09 853564 859781 Bva07g02464 07 19848426 19855654 BWGD
Bva07g02464 07 19848426 19855654 Bva07g02464 07 19848426 19855654 ECH