Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g02397 ATGTACAAGAACCAGCTTCAAGAGCTGGCCCAGCGGAGCTGCTTCAACCTTCCTTCCTATACGTGCATTAGGGAAGGTCCCGATCACGCGCCGAGGTTCAAGGCCACGGTTAACTTTAATGGCGAGATCTTTGAGAGCCCTCACTATTGTTCTACTCTCCGTCAAGCCGAACACTCTGCTGCTGAGGTTGCGCTGAATTCTCTCTCCAACCGTGGACCCTCACACTCGCTTGCTGCGAGAATCCTGGACGAGACTGGAGTCTACAAGAATCTCTTGCAGGAAATTGCCCAGAGGGTCGGAGCTCCATTGCCCCAATACATGACATTCAGGTCAGGCCTAGGACATCTACCCGTTTTTACCGGGACAGTAGAATTAGCTGGAATCACATTTTCTGGTGAACCTGCCAAGAATAAGAAACAGGCTGAGAAAAATGCAGCTATGGCTGCTTGGTCGTCTTTGAAACAACTTGCTAAAGAAACTGCAAGTTCTTCATCTGAACCCGAGAACAATGATGAACTAGAACAGATCACAATAGCAAGGGCGTTACTGAACTACCGTCTGAAGGAAAAGATGGCAATGACTAATCCTAATGCTCCAATTCCATTTCCAAAGAAATTTCAGATTCAAAATCCTAGGCCAACCAGTCCGCAACCTCCCCCTGCTACTACATCAAAGATCCTTCCTTTAATTTGCCTGAAGACAGCATCTCGAAGCAGGTCCTCATTGACAACGGCAATTGAAAGTCTTCGAAGCAGGGCTCCTCTAGCAGCAGCAACCAGTGACAATTCCATAGTGCCATCACAGTCTTGTGCACCAGAAAACCGTTGTGCCCGCCCCCTCAAGTTCCCTGCAGCGGGAGCAGCACCTTATGTCCCTATTCGACAAATGAGATCGCCTTGCCAGGGTATTGCACCTCCAGTGACCATAAGGACTTCTGTACCCGTGTTCTCTGCACCACCTCGTCAACCAGCACCAGCTGCTGTTCCCCATCAGATGTCTCGGGCCCCACCTGTAAGAGTTGCCCCTCCTGTCACCATTAGGCAGGCGATTCCAGTATTTGCTGCTCCGCCAGTCCGAAAAGATGAACCTGCGCCCGTCCGAAAAGAAGATCCACTGATTCTTAGCAGTGCCCTTACTCAGCAAGATAAATTGGCAGCTAAAGCTCAGGAGACGGAGACAAAGATTGAGAACATCATAGCAGAATCTCAGACAGTGCAGAGCTTGGAGCAGCTGAAAATTTGTTCTTTGGAATGCATCTG 1259 0.4948 MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFESPHYCSTLRQAEHSAAEVALNSLSNRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPQYMTFRSGLGHLPVFTGTVELAGITFSGEPAKNKKQAEKNAAMAAWSSLKQLAKETASSSSEPENNDELEQITIARALLNYRLKEKMAMTNPNAPIPFPKKFQIQNPRPTSPQPPPATTSKILPLICLKTASRSRSSLTTAIESLRSRAPLAAATSDNSIVPSQSCAPENRCARPLKFPAAGAAPYVPIRQMRSPCQGIAPPVTIRTSVPVFSAPPRQPAPAAVPHQMSRAPPVRVAPPVTIRQAIPVFAAPPVRKDEPAPVRKEDPLILSSALTQQDKLAAKAQETETKIENIIAESQTVQSLEQLKICSLECI 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g02397 419 PANTHER - 1 375 - -
Bva07g02397 419 SMART DRBM_3 2 69 IPR014720 -
Bva07g02397 419 SMART DRBM_3 88 154 IPR014720 -
Bva07g02397 419 ProSiteProfiles Double stranded RNA-binding domain (dsRBD) profile. 87 155 IPR014720 -
Bva07g02397 419 ProSiteProfiles Double stranded RNA-binding domain (dsRBD) profile. 1 70 IPR014720 -
Bva07g02397 419 SUPERFAMILY dsRNA-binding domain-like 2 68 - -
Bva07g02397 419 Pfam Double-stranded RNA binding motif 88 153 IPR014720 -
Bva07g02397 419 Pfam Double-stranded RNA binding motif 2 68 IPR014720 -
Bva07g02397 419 Coils Coil 381 401 - -
Bva07g02397 419 PANTHER RNA BINDING PROTEIN, PUTATIVE-RELATED 1 375 - -
Bva07g02397 419 CDD DSRM_AtDRB-like_rpt2 86 154 IPR044451 GO:0003725
Bva07g02397 419 Gene3D - 84 155 - -
Bva07g02397 419 CDD DSRM_AtDRB-like_rpt1 1 69 IPR044450 GO:0003725
Bva07g02397 419 Gene3D - 2 83 - -
Bva07g02397 419 SUPERFAMILY dsRNA-binding domain-like 88 160 - -
Bva07g02397 419 MobiDBLite consensus disorder prediction 196 224 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g02397 Bva-Chr7 19469780 19473690 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g02397 - - gmx:100815739 607.831
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00250 09 1263729 1267451 Bva07g02397 07 19469780 19473690 BWGD
Bva07g02397 07 19469780 19473690 Bva07g02397 07 19469780 19473690 ECH