Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g01927 ATGTCTCTCATTTTTGTATATGGTTACTTGATGTTCTTAGCTGCTAAGTCCTTATCAGCGGGACGTGAGATTTTGCTTCAAATTCTTGGACCTGGTGTCATTGGGCATCTGGGCTGTCTGAGCAAAGAAACTGCTCAAACCCAGGTCTCTGTAGCGATGGGATTGCTAGCTGGATCAACTGTAATGCTTCTGACAGTACTATGGGGCTCCTGTCTTATTGTCGGAAAGTGTGACCTGGAAAATTCAGTGGCAGTAGAACAGAAAGATACAAAAGGCTTTAGCATACATGGATTGGTCCTCTATCAGATTTTTCTGCCATGGATTCAGAGTAGACTATTTGCGTGTGTCAAGCATAAGTACATAATGTCAGGTCTTCTAGAACAACTAACGACACAATCAAAGGGGCGTTTCCTTAAGGATAATGATGAACCTGACATTGAGGTTATACAACAGTTATTTGAGACCCTTGCTAAGAATTCAAGCGGACACATAACAGCCAAAGACTTAAAGAGCTCTTATGATAGAGGAATGCACTTTGAGGGGACAGACATGGAGATAAATGATGCGGTTGTCGAAGTCATTGTTGGAGTTTGTCAAAGGAATCACAAAGTGGGTTA 617 0.4198 MSLIFVYGYLMFLAAKSLSAGREILLQILGPGVIGHLGCLSKETAQTQVSVAMGLLAGSTVMLLTVLWGSCLIVGKCDLENSVAVEQKDTKGFSIHGLVLYQIFLPWIQSRLFACVKHKYIMSGLLEQLTTQSKGRFLKDNDEPDIEVIQQLFETLAKNSSGHITAKDLKSSYDRGMHFEGTDMEINDAVVEVIVGVCQRNHKVG 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g01927 205 ProSiteProfiles EF-hand calcium-binding domain profile. 144 179 IPR002048 GO:0005509
Bva07g01927 205 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 2 92 IPR004713 GO:0006812|GO:0008324|GO:0016021
Bva07g01927 205 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 99 190 IPR004713 GO:0006812|GO:0008324|GO:0016021
Bva07g01927 205 PANTHER SODIUM/CALCIUM EXCHANGER NCL 99 190 - -
Bva07g01927 205 PANTHER SODIUM/CALCIUM EXCHANGER NCL 2 92 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g01927 Bva-Chr7 17135314 17137192 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g01927 3 194 EF-hand Containing Proteins AT1G53210 40.000 2.54e-51 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g01927 - - oeu:111393479 184.496
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva07g01927 07 17135314 17137192 Bva09g00906 09 4672442 4676772 ECH
Bva07g01927 07 17135314 17137192 Bva07g01691 07 15900031 15903803 ECH
Bva07g01927 07 17135314 17137192 Bva07g01927 07 17135314 17137192 ECH