Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g01872 ATGGAGTCAATACTGGCGCGAGCTTTGGAGTACACCCTCAAGTACTGGCTCAAATCCTTCTCCAGGGATCAGTTCAAGTTGCAGGGTCGGACTGTGCAGCTTTCTGATTTAGatataaatgGGGATGCATTGCATTCAAGTGTTGGATTGCCACCGGCGCTGAATGTAGCGACAGCTAAAGTTGGAAAATTGGAGATAATACTTCCATCTGTAAGCAATGTACAAATAGAGCCAATCATTGTCCAAATCGATAGACTTGATTTGGTTTTTAAGGAGAATTCTGATTTCGATGCATCTGAAAGTCCAAAGAGCACTAGTGCCTCCACAAAGAGTAGCGGTTATGGTTTTGCTGATAAGATTGCAGATGGAATGACTATACAGATTCTTACAGTTAATTTATTGCTTGAAACTCGTGGGGGTGCTCGTCGCCAAGGGGGAGCGACATGGGCATCACCCATGGCATCCATCACTATACATAACCTTTTGCTGTATACCACCAATGAAGATTGGCAGgTTGTAAATCTTAAAGAAGCACGGGAATTCTCAAGTAACAAGAAGTACATATACGTGTTCAAAAAACTTGAGTGGGAATCTTTGTCTATTGATCTTTTGCCTCATCCTGACATGTTCACGGATGCTACTTTAGGTCGCTCTCAACAGGGAGCGAACCTGAGAGATGATGATGGTGCAAAGCGAGTTTTCTTTGGAGGCGAGCGTTTAATAGAAGGAATATCAGGAGAGGCTTATATTACTATTCAGAGAACTGAATCAAACACTCCACTTGGGCTTGAAGTTCAGTTACATGTCACTGAAGCCATTTGCCCTGCATTAAGTGAACCAGGACTACGTGCTCTTCTCCGCTTTATGACGGGATTATATGTTTGTCTAAACAGGGGAGATGTTGATTTTAAGGCTCAACAGAGGTCTACAGAAGCAGCTGGGCGATCTCTTGTCTCTATTATTGTGGACCACGTATTTCTTTGTATTAAAGATACAGAATTCCAGCTCGAGCTTTTAATGCAAGCCCTCTCTTTTTCTCGGGCCAGTGTTTGTGAAGGAGATAATGACAATAACTTGACTAGAATTACAATTGGTGGATTCTTTTTGAGGGACACCATTTCACACCCTCCATGTGCCTTAGTGCAACCTTCAATGCAAGCTGCCACATTAGATGTTCTTCATGTGCCGGAATTTGCTAGGAGCTTTTGCCCTCCAATATATCCTTTCGGAGAGCAGCAGTGGCAGTTAATCGAGGGTACTCCTCTAATATGTCTCCATTCCCTTCAGATCAAGCCATCTCCACTTCCACCATCCTTTGCTTCTCAGACAGTTATTGACTGTCAGCCTCTTATGATTCATCTCCAAGAAGAATCCTGTCTGAGGatatcttctttcttatctGATGGTGTTGTTGTAAATCCTGGTGATGTTTTGCCTGATTTTTCAGTAAATTCTCTTGTTTTCACTCTCAAGGGACTGGATCTTACAGTTCCTTTGGACAAGGCCGCCGAATTGGATATTCCTGAAAGCAACATGGACGGTGTAGTCCAGAGCTCCTTCGCTGGAGCAAGGCTTCATATCGAAAGCCTCTTCTTTTCAGCTTCACCTTCACTTAAAGTAAAAATGTTGAACCTGGAGAAGGATCCTGCTTGCTTCTGTCTTTGGGAAGATCAACCAATTGATGCTTGCCAAAAAAAGTGGACTGCTAGAGTATCACATTTTACCCTGTCTCTTGAAACATGTACTGGCAAATTTGGACGTCAGAATTCTCTTGGATGGACTGCAGGATTGTGGAGATGCGTTGATATGAAAGATGCTTGCATTGAAGTAGCTATGGCAACTGCTGATGGAAGCCCATTGTTGAAGGTTCCTCCACCAGGTGGTATTGTGAGGGTTGGAATTACTTTTGGACAAATTCTGACAAACACTTCTGTTGAACAGTTACTTTTTGTCCTAGATCTGTATGCTTATTTTGGTAAAGTTAGTGAGAAAATAGAAGTAGCTGGAAAGACTAAACGATCGAAGGATGCTCTGGTTAAATGTTCTAGTGGAAGGCTGATTGACAAGGTTCCTAGTGACACTGCTGTAAGTATAGCAGTGAAGGACCTCCAACTTAGATTTCTGGAGCCTTCTTCTATGAATGTCAAGGGAATTCCTTTAGTACAGTTTATCGGAGATGATCTGTTCATTCATGCCAGTCATAGAACCCTGGGTGGTGCCATTGCAGTTTCATCCACTTTACGATGGGATAGTGTTGAGATAGATTGTGCAGATGCTGATGGGAACTTGGCATGTGAAAATGGATCATTTTTGAGTTCTGGTGAAAATGTTATCACAATGAGTGATCCTGTATACTCTCAATCAAGAGCTGTTTTCTGGGTGCATAATAAAAAGAACCATAAATCCAATGGAAATGTTCTTTCAGCTCCTTTTCTAGACATAAGCATTGTGCATGTCATTCAATTAGATGAACAACACATGGGGTCTTATAGTTTAAATGTCTCAGCTTCTATATCAGGTGTTCGCCTTGGTGGAGGAATGAACTATGCTGAAGCCCTTCTGCATCGATTTGGAATACTTGGGCCTGATGGAGGTCCCGGGAAGGAACTTTGTAAAACGTTAGAACACTTACAAATGGGACCACTGTCGAAACTTATTAAGACTATGCCTTTCAATGTTGATAATTCAGAAGatgATGAAACTATGAGAGAAGGGGAAGAAAGCAATTTTCCACGCTTGAAGAAGCCAGATGATGTGGATGTGACAATTGAATTGAGAGACTGGCTATTTGCTCTTGAAGGTGCTCAAGAGATGGCTGAAAGATGGTGGTTCTCCAGCCATGAAGGTATAGGTAGAGAAGAAAGGTGCTGGCACACAACTTTCAGTGATCTAAGAGTTAATGCAAAAAGTAGGCCAAAGAATGTTCCAAATGGCAAGGCTCAATTGCTTGGAATGCAAAAGTATCCTGTGGAACGTATTATGGTTGAAGTTGAAGGGTTGCAGATCTTGAAGCCTCGTACCCAAAAGAACATTCCTCCATCGATTTTAGGTGCTAATGGGGGGAAAGAGTCTACTGATGCAGTTGTGGGAATTGGACTCGAAGTTCGCTTGTTACCCTGTGAGGATAATGTTGATGAAGAAATGGCTAATTGGGAGGTGGAAAacctaaaattttctattaaccAACCGATTGAGGCAGTTGTAACCAAGGATGAGTGTCAGCACCTTACTTTTCTATGCAAATCTGAGATTGACTCGCTGGGCCGGATAACAGCTGGAATTCTACGGCTGCTTAAGCTAGAAGGTTCTGTGGGCCAGTCTGCAATACATCAACTAAgcaaccttgGAAGTGAAGGCATTGAGAAATTCTTCTCTCCGCGAAGCTTCAGCGGAGATGGTAGTATTGGATTTTCTCCATTATCAAACCCGTTAAACGGAAGCACACATAGAAATGCAGAACCGACGCTAACTTTGCTTGAGGAAGCGGTTATTGATTCAAAGGCCAAACTTAATGATTTAGTTACTGATATTGGTGCTTCAGAATCTTCATTTGAGCATCTTGCTGCTGTCAAACAACTTGGTGAAAAGATTGAGAGCATGCGGATTTTATTGATGCAATTACGGAATCAACTTTA 3635 0.4171 MESILARALEYTLKYWLKSFSRDQFKLQGRTVQLSDLDINGDALHSSVGLPPALNVATAKVGKLEIILPSVSNVQIEPIIVQIDRLDLVFKENSDFDASESPKSTSASTKSSGYGFADKIADGMTIQILTVNLLLETRGGARRQGGATWASPMASITIHNLLLYTTNEDWQVVNLKEAREFSSNKKYIYVFKKLEWESLSIDLLPHPDMFTDATLGRSQQGANLRDDDGAKRVFFGGERLIEGISGEAYITIQRTESNTPLGLEVQLHVTEAICPALSEPGLRALLRFMTGLYVCLNRGDVDFKAQQRSTEAAGRSLVSIIVDHVFLCIKDTEFQLELLMQALSFSRASVCEGDNDNNLTRITIGGFFLRDTISHPPCALVQPSMQAATLDVLHVPEFARSFCPPIYPFGEQQWQLIEGTPLICLHSLQIKPSPLPPSFASQTVIDCQPLMIHLQEESCLRISSFLSDGVVVNPGDVLPDFSVNSLVFTLKGLDLTVPLDKAAELDIPESNMDGVVQSSFAGARLHIESLFFSASPSLKVKMLNLEKDPACFCLWEDQPIDACQKKWTARVSHFTLSLETCTGKFGRQNSLGWTAGLWRCVDMKDACIEVAMATADGSPLLKVPPPGGIVRVGITFGQILTNTSVEQLLFVLDLYAYFGKVSEKIEVAGKTKRSKDALVKCSSGRLIDKVPSDTAVSIAVKDLQLRFLEPSSMNVKGIPLVQFIGDDLFIHASHRTLGGAIAVSSTLRWDSVEIDCADADGNLACENGSFLSSGENVITMSDPVYSQSRAVFWVHNKKNHKSNGNVLSAPFLDISIVHVIQLDEQHMGSYSLNVSASISGVRLGGGMNYAEALLHRFGILGPDGGPGKELCKTLEHLQMGPLSKLIKTMPFNVDNSEDDETMREGEESNFPRLKKPDDVDVTIELRDWLFALEGAQEMAERWWFSSHEGIGREERCWHTTFSDLRVNAKSRPKNVPNGKAQLLGMQKYPVERIMVEVEGLQILKPRTQKNIPPSILGANGGKESTDAVVGIGLEVRLLPCEDNVDEEMANWEVENLKFSINQPIEAVVTKDECQHLTFLCKSEIDSLGRITAGILRLLKLEGSVGQSAIHQLSNLGSEGIEKFFSPRSFSGDGSIGFSPLSNPLNGSTHRNAEPTLTLLEEAVIDSKAKLNDLVTDIGASESSFEHLAAVKQLGEKIESMRILLMQLRNQL 1211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g01872 1211 Coils Coil 1190 1210 - -
Bva07g01872 1211 Pfam N-terminal region of Chorein or VPS13 1 104 IPR026854 -
Bva07g01872 1211 PANTHER AMINO-TERMINAL REGION OF CHOREIN, A TM VESICLE-MEDIATED SORTER 1 1210 - -
Bva07g01872 1211 PANTHER UNCHARACTERIZED 1 1210 IPR026728 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g01872 Bva-Chr7 16845428 16853663 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g01872 - - gmx:100811661 1781.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00754 09 3841155 3849213 Bva07g01872 07 16845428 16853663 BWGD
Bva07g01872 07 16845428 16853663 Bva07g01872 07 16845428 16853663 ECH