Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02737 ATGGAAGAGAAGAGGAAGCACAAGGTGGAGAATGAAGTGGGTTGTGGGTTTATGGGGACAATTTTCCAACTCAGAACCTGTAGGCTGAGAAAATCATCTGTGCATTCACTGCCTACGAACCCAACCAACAATGTCGGCAACGATCAGGGCAAAAATGAATCCAAGAAGCCTCTCGCTCCCAGTCAAGAATCCAAAAATTCAGAACAGAGAGGACCCAGAAAGAGCACCTCTGGCTCTGGCCATGGAACACCTCCTACCTACCGAAACAACCAGAATCGGAGACCATCGGATGCTGAAAGGAGCTCAAAATCATCATCCTCTGGTAATTCAACCCATATAAAGACCCAAAAGAGTCAGGAAATGAATGATGAGAGCAAGCTAGGGAGAGAGTCCACTGGAAACACTGTGGAGCTTGCAAGGATAATCACTGGTCAGAACAGGGCCCTTATCAAAGTTACAGGGAATTTACTTGTAAGCAATAGCCCCAGAAGTAGCATAAAGACACTAGAATCCCCTCCTAGGAATAAAGATTCTACTTCTTACAATAACTTTAATATGGGCGTGATGGGTAATATCGTGAGGAAGAATAGTGATGATTTAGCCCAATTTCGGAGTCCAAGGAACAGAGTGGACCCTGAGAAGTTGAAGTGTTTGGGCAATGAAGCATACAAACAGGGGAGATTTGAAGAGGCTTTGGGTTTCTATGACCAAGCAATTACTCTTGATTCAAATAAGGCAACGTATCATTGCAATAAGAGTGCAGCGTTAATTGGTTTAGGCCGGCTTCTCGAAGCAATTGTTGAGTGCGAGGAAGCTATTCGTCTGGAGCCTTGTTATAACAGAGCCCACCACCGTTTGGCAACATTATATATAAGACTGGGGAAAGCAGAAAAGGCGCTGAATCATTGCAATCCCACAACCCCATATGCTGACTCAGTACTCGCCTTCCAAGCCCAGGCTCTTGAAAATCACCTTAAAAAATGTAGTGAAGCTCGGAAATTGAACCAATGGAACACTGTACTAAAGGAGACACAATCTGCAATTTCATCAGGTGCTGATTCAGCTGCACAGGTCTATGCTTTGCAAACTGAAGCCTTATTGAAGCTCCTCAGACACCAAGAGGCTAATGCTACCCATCAGAAAATTCCCAAGTTTGCACTTAATTGGTGTACCAAGCTTTTTGGTCCGCTTGTTACTGCCTACCTTCTGATGATAGACGCACAGATTTACTTGGCAACCGGCAGGTTCGAGGATGCGATGACAGCAGCACAACAAGCTGCTAGAGTTGATCCGAGCAACAAAGAGGTGAGCGCAGTGGTAAAAAAAGCCAGAGCAGTAGCATCAGCCAGAATGAGTGGTAACTTACTCTTCAAAGCATCAAATTTCAAGGAAGCATATGCCGCATACAACGAAGGGCTAGAGCATGATCCAGACAACTCTGTTTTGCTATGCAACAGAGCGGCATGTCGTTCAAAGCTAGGGCAATACGAGAAAGCAATTGAGGATTGTAATGCAGCCCTTGCAGCTCAACCTCAATACAGCAAGGCAAGGTTAAGGAGGGCAGATTGCAATGCCAAGttGGAAAGATGGGAAGCTGCCATTCAAGACTATGAAATGCTGTTGAGAGAAAAGCCAGGCGATGAGGAGGTGGCCAGGGCTCTGTTTGAGGCCCAGCTCCAACTCAAGGTGCTGCGTGGTGAAGATATTAAAGGCTTGGAATTTGgttcaaatttgtttttcatctCAAGCAACGATCGCTTTAGACACTACGTAACCTCACCCGGGATGTCTGTGGTGCTTTTCTGCAACAAGGCCACCCACAAGCAAGTACTGCTGATACTGGAGCAAACCTGCAAGAGATTCCCATCAGTTAATTTCCTCAAGGTGGAAATTGAAGACCACCCTTACTTGGCGAAATCAGAAGGTCTGAGCTCCATCCCAGCCTTCAAAATATACAAGAACGGGTCAAGGGTCAAGGAAATTCCAGGAGATAACATCGACTTGTTGGAAAAATCAGTAAAATTGTACACCAACTG 2036 0.4514 MEEKRKHKVENEVGCGFMGTIFQLRTCRLRKSSVHSLPTNPTNNVGNDQGKNESKKPLAPSQESKNSEQRGPRKSTSGSGHGTPPTYRNNQNRRPSDAERSSKSSSSGNSTHIKTQKSQEMNDESKLGRESTGNTVELARIITGQNRALIKVTGNLLVSNSPRSSIKTLESPPRNKDSTSYNNFNMGVMGNIVRKNSDDLAQFRSPRNRVDPEKLKCLGNEAYKQGRFEEALGFYDQAITLDSNKATYHCNKSAALIGLGRLLEAIVECEEAIRLEPCYNRAHHRLATLYIRLGKAEKALNHCNPTTPYADSVLAFQAQALENHLKKCSEARKLNQWNTVLKETQSAISSGADSAAQVYALQTEALLKLLRHQEANATHQKIPKFALNWCTKLFGPLVTAYLLMIDAQIYLATGRFEDAMTAAQQAARVDPSNKEVSAVVKKARAVASARMSGNLLFKASNFKEAYAAYNEGLEHDPDNSVLLCNRAACRSKLGQYEKAIEDCNAALAAQPQYSKARLRRADCNAKLERWEAAIQDYEMLLREKPGDEEVARALFEAQLQLKVLRGEDIKGLEFGSNLFFISSNDRFRHYVTSPGMSVVLFCNKATHKQVLLILEQTCKRFPSVNFLKVEIEDHPYLAKSEGLSSIPAFKIYKNGSRVKEIPGDNIDLLEKSVKLYTN 678
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02737 678 Coils Coil 520 540 - -
Bva06g02737 678 PANTHER TPR REPEAT-CONTAINING THIOREDOXIN 1 676 IPR044534 -
Bva06g02737 678 SUPERFAMILY Thioredoxin-like 570 674 IPR036249 -
Bva06g02737 678 MobiDBLite consensus disorder prediction 101 116 - -
Bva06g02737 678 MobiDBLite consensus disorder prediction 33 92 - -
Bva06g02737 678 Pfam TPR repeat 219 254 - -
Bva06g02737 678 PANTHER 43KDA POSTSYNAPTIC PROTEIN-RELATED 1 676 - -
Bva06g02737 678 SMART tpr_5 480 513 IPR019734 GO:0005515
Bva06g02737 678 SMART tpr_5 246 279 IPR019734 GO:0005515
Bva06g02737 678 SMART tpr_5 400 433 IPR019734 GO:0005515
Bva06g02737 678 SMART tpr_5 446 479 IPR019734 GO:0005515
Bva06g02737 678 SMART tpr_5 212 245 IPR019734 GO:0005515
Bva06g02737 678 SMART tpr_5 514 547 IPR019734 GO:0005515
Bva06g02737 678 SMART tpr_5 280 313 IPR019734 GO:0005515
Bva06g02737 678 Gene3D Tetratricopeptide repeat domain 210 565 IPR011990 GO:0005515
Bva06g02737 678 ProSiteProfiles TPR repeat profile. 212 245 IPR019734 GO:0005515
Bva06g02737 678 SUPERFAMILY TPR-like 212 435 IPR011990 GO:0005515
Bva06g02737 678 SUPERFAMILY TPR-like 451 562 IPR011990 GO:0005515
Bva06g02737 678 MobiDBLite consensus disorder prediction 162 183 - -
Bva06g02737 678 MobiDBLite consensus disorder prediction 33 132 - -
Bva06g02737 678 Gene3D Glutaredoxin 575 678 - -
Bva06g02737 678 ProSiteProfiles TPR repeat profile. 400 433 IPR019734 GO:0005515
Bva06g02737 678 CDD TRX_family 587 674 - -
Bva06g02737 678 ProSiteProfiles TPR repeat profile. 446 479 IPR019734 GO:0005515
Bva06g02737 678 Pfam Tetratricopeptide repeat 492 547 - -
Bva06g02737 678 Pfam Tetratricopeptide repeat 407 480 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02737 Bva-Chr6 17210578 17213827 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g02737 215 299 EF-hand Containing Proteins AT2G32450 31.765 8.68e-06 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02737 K09527 - gmx:100814381 882.093
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g02195 12 16923771 16926633 Bva06g02737 06 17210578 17213827 BWGD
Bva06g02737 06 17210578 17213827 Bva06g02737 06 17210578 17213827 ECH