Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02714 atGGCAATGTTCAGATGTTTCTCTGTTATACTCGGAAAGGAGAAGAGAGTCAAGGAGAAGGAACCATCTTCGAGTGAGCACCTCCCTCAAACTATGCGAGCTAAAGTAGAACATTCGAGAAAATCATTGGAGGCTGATGAATTGATCCCCGCTAATTTTGATGCTGAAGTACCCTGTGGTAGCCAAAAGAATTCTCGGAGTCATGTGAGGGTTATGAGCCTTGAGAGCCCTGTTAAGGCTGAAATGGAGGAAGCTTATGAAGGGGAAGATGAGCATTCAGATCTCTGCTCGATGAAGAGGGATTTCTCTGACTTTGATCTTCAAGCCCGTGCAGAGTTTTCAGGTGAAGAAGGTTATAACCCTGGAGACaaagagataaatttatatgaaattcaaGCCAATAACCATTTCGAAGACAGAAATGATAAAGACAGTGAAAAGAGTCCCGATATGATCCATAATGGACATGTCAGTGATCCTGGGATGGGCAAGTCATTCTTCTGGGCTTCTCCAAAGCTCCAGCGGTCCTGCTCTGACTTGGAAAGAAGGGACGTGTTTAGAAAGATAACTCACCCTTTGCCTTCTTCAAAGTCACAGTCCTACGAAGATTTGCAGGCATTATCAGCAGTGGAGAATGAATTTGCCAATTTTAAAAGCCCCAGGTCTGAGAAGTCTCATTGCAGTGCTGATAGAGTGATGCTGAGAAAGCATTCGTCTAGCCAAGTTCTCCCTTCTAGAAGTAGAAGATTGTGGTGGAAGTTGTTCCTGTGGAGCCACAGGAACATACACAAACCTTGGACTAGCAGAACAACCCAATTACTCCCTCCTAGTACTTCTTTAAATAGGCGGAGTGGGTATACTTCAGATACTCTTGAACCAAAACAAGAGATGGCCTTGAGAAATGTGGAATCATATGGATCATTCACTGGGGAATCCGTTGGCAAAAGCTGCATTGATGAAAGTATGGATAACCAAATCTGGGGAAGAAATCACAATGCAGATTCGGGTTTCTGGCCCCAAAACCAATGGCTTGCTTTCTCAACAGAATCATCCTCTCTTTCAAGAGTGGATGAGTGGGTAAGAGATCTTGAAACTCAACAGTCACTACATGAAAATGATAACAATGTTGAAAGTTTTGTCTTTCCACCATCTCCTGATGCTGACAGATCAATGGCAAAGGGCACGCCTCAGCATCTTCGACATCCTGATGCTATTCTTTCCAAGGAGATTTTGACTGCCAATAATGTTGTCCAGTCTCTTAATCCAACCTCAACTGTGGCTCACATCTCGGGTATTGGTTTAAAAGCTATCCCTGCCATTTCACACTTCTCTAGTCTTCGCTCTGTCAACTTGTCAAGCAACTTCATAGTCAATATCACCCCAGGTTTTCTCCCTAAGGGCCTTCACACGCTTAATTtgtcaagaaataaaatcagcACCATTGAGGGACTGAGAGAATTAACCAGATTGCGGGTACTTGATCTAAGTTACAATCGCATCTCTAGAACTGGACAAGGGTTATCAAATTGTACACTCATCAAAGAGTTATATATTGCGGGGAACAAGATAAGTGATGTCGAGGGGCTACACAGGCTACTTAAGCTAACAGTTTTAGACCTAAGTTTCAACAAGATCACAACAACAAAAGCGTTAGGCCAGCTGGTAGCTAACTACCACTCTCTTCAGGCTCTGAATCTGCTTGGAAATCCAATTCAGAGCAACATAAGCGATGACCAGTTGCGCAAGGCAGTTTGTGGTCTCCTTCCGAAGCTTGTGTACCTGAATAAGCAAGCTCTCAAACCTCAGAGGGCAAGAGAAGTACTTACAGACAGTGTTGCCAAAGCTGCACTTGGGAACAGCAACCGAAGCTCGTACAGAAAAGCACTTAAGAGAGCTAGCCAGGGAGGATCAGGTCCCTCTACAGGGCACCGGAGCACTGCGAGTGGTGCCCAGAAAAGCAGGAACAGGTCAAAGCTCGGAACTCCTAATCGCCAGTTGCCTAAAAAATA 2009 0.4375 MAMFRCFSVILGKEKRVKEKEPSSSEHLPQTMRAKVEHSRKSLEADELIPANFDAEVPCGSQKNSRSHVRVMSLESPVKAEMEEAYEGEDEHSDLCSMKRDFSDFDLQARAEFSGEEGYNPGDKEINLYEIQANNHFEDRNDKDSEKSPDMIHNGHVSDPGMGKSFFWASPKLQRSCSDLERRDVFRKITHPLPSSKSQSYEDLQALSAVENEFANFKSPRSEKSHCSADRVMLRKHSSSQVLPSRSRRLWWKLFLWSHRNIHKPWTSRTTQLLPPSTSLNRRSGYTSDTLEPKQEMALRNVESYGSFTGESVGKSCIDESMDNQIWGRNHNADSGFWPQNQWLAFSTESSSLSRVDEWVRDLETQQSLHENDNNVESFVFPPSPDADRSMAKGTPQHLRHPDAILSKEILTANNVVQSLNPTSTVAHISGIGLKAIPAISHFSSLRSVNLSSNFIVNITPGFLPKGLHTLNLSRNKISTIEGLRELTRLRVLDLSYNRISRTGQGLSNCTLIKELYIAGNKISDVEGLHRLLKLTVLDLSFNKITTTKALGQLVANYHSLQALNLLGNPIQSNISDDQLRKAVCGLLPKLVYLNKQALKPQRAREVLTDSVAKAALGNSNRSSYRKALKRASQGGSGPSTGHRSTASGAQKSRNRSKLGTPNRQLPKK 669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02714 669 MobiDBLite consensus disorder prediction 18 40 - -
Bva06g02714 669 PANTHER OUTER ARM DYNEIN LIGHT CHAIN 1 PROTEIN 4 660 - -
Bva06g02714 669 ProSiteProfiles Leucine-rich repeat profile. 534 555 IPR001611 GO:0005515
Bva06g02714 669 ProSiteProfiles Leucine-rich repeat profile. 467 488 IPR001611 GO:0005515
Bva06g02714 669 SUPERFAMILY Outer arm dynein light chain 1 434 598 - -
Bva06g02714 669 Gene3D Ribonuclease Inhibitor 508 604 IPR032675 -
Bva06g02714 669 PANTHER NISCHARIN RELATED 4 660 - -
Bva06g02714 669 SMART LRR_sd22_2 465 486 - -
Bva06g02714 669 SMART LRR_sd22_2 532 553 - -
Bva06g02714 669 SMART LRR_sd22_2 487 509 - -
Bva06g02714 669 SMART LRR_sd22_2 510 531 - -
Bva06g02714 669 Gene3D Ribonuclease Inhibitor 345 507 IPR032675 -
Bva06g02714 669 MobiDBLite consensus disorder prediction 139 158 - -
Bva06g02714 669 MobiDBLite consensus disorder prediction 139 153 - -
Bva06g02714 669 Pfam Leucine rich repeat 445 500 IPR001611 GO:0005515
Bva06g02714 669 ProSiteProfiles Leucine-rich repeat profile. 489 511 IPR001611 GO:0005515
Bva06g02714 669 ProSiteProfiles Leucine-rich repeat profile. 512 533 IPR001611 GO:0005515
Bva06g02714 669 Pfam Leucine Rich repeat 534 546 IPR001611 GO:0005515
Bva06g02714 669 SMART LRR_typ_2 487 510 IPR003591 -
Bva06g02714 669 SMART LRR_typ_2 532 554 IPR003591 -
Bva06g02714 669 SMART LRR_typ_2 443 465 IPR003591 -
Bva06g02714 669 MobiDBLite consensus disorder prediction 623 669 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02714 Bva-Chr6 17088698 17092261 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02714 - - gmx:100810094 837.795
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g02219 12 17053731 17057657 Bva06g02714 06 17088698 17092261 BWGD
Bva06g02714 06 17088698 17092261 Bva06g02714 06 17088698 17092261 ECH