Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02190 ATGGTGGATCAATATGCGCTTGCTTGGATTTTAGGCGCTGTGCTCAGCCTCGCTGTGCTCTACAAATTGGTTTTCCCCTGGACGAACCCTAATGTTTCATCAGATGCCGCCGCACGGTGCACGAAGAGCATAACAACAGGTAACGGAGAATGCAGATCCACTAACCGCAAGGGTGAGGTCGACGTTATCATCGTCGGCGCTGGTGTCGCTGGCGCGGCTCTGGCTCACACACTTGGCAAGGATGGACGTAGAGTATATGTAATTGAAAGAGATCTCAGTGAACCTGACCGAATAGTTGGGGAGTTGCTACAACCTGGGGgatatcttaaattaattgagcTAGGACTAGAAGATTGTGTGGAGGACATTGATGCTCAGCGAGTGTTTGGTTATGCTCTCTTCAAGGATGGGAAAAATGCTCGACTCTCTTATCCCTTGGAGAAGTTCCACTCTGATGTCTCCGGCAGAAGCTTTCACAATGGACGTTTTATTCAGAGGATGAGGGAGAAGGCTGCGTCTCTTCCCAaTGTACAATTGGAGCAAGGAACTGTCACTTCCCtaattgaagaagaaggaacaGTTAAAGGTGTGCAATACAAGACTAAAGATGGCCAACAATTTGTGTCATATGCTCCGCTTACCATTGTTTGTGATGGCTGCTTCTCAAACTTGCGTCGTTCTCTTTGTAATCCTAAGGTAGATGTGCCCTCCTGTTTTGTTGGTTTAGTTTTGGAGAATTGTGAACTTCCTTTTGCAAATCATGGTCATGTTATACTAGCAGATCCCTCGCCAATTTTGTTCTACCCTATCAGTAGTACAGAGGTTCGCTGTCTGGTTGATGTGCCTGGTCAGAAAGTTCCTTCTATTTCAAATGGTGAAATGGCGAAGTATTTGAAGTCTGTGGTGGCTCCACAGATTCCTCCGGAACTTTATGATGCCTTTGTAGCTACAGTTGATAAGGGCAACATAAGGACAATGCCAAACAGAAGCATGCCAGCGGCTCCTTATCCTACCCCGGGAGCTCTTCTGATGGGAGATGCATTCAACATGCGCCATCCTCTCACTGGGGGAGGAATGACTGTGGCATATTCTGATATAGTGGTGCTGCGGAATCTTCTCAGGCCTCTCCGTGATCTGAATGACGCGTCCACACTTTGTAAATATCTTGAATCCTTTTATACCTTGCGTAAGCCTGTGGCATCCACCATAAATACATTGGCAGGAGCCCTTTACAGGTTTTCTGCGCAAGGACCCGTCTCTTTGCTTTCGGGATTAAACCCTCGGCCGATAAGCTtggttcttcatttctttgctGTTGCAATATATGGTGTTGGCCGTTTACTGTTACCATTTCCTTCACCTAAACGGATATGGATTGGGGCCCGATTAATCTGTGGTGCTTCAGGAATCATCTTCCCCATAATTAAAGCAGAAGGAGTTCGTCAAATGTTCTTCCCTGCGACTGTTCCGGCTTATTACAGGACTCCCCcgactaaata 1499 0.4516 MVDQYALAWILGAVLSLAVLYKLVFPWTNPNVSSDAAARCTKSITTGNGECRSTNRKGEVDVIIVGAGVAGAALAHTLGKDGRRVYVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEDIDAQRVFGYALFKDGKNARLSYPLEKFHSDVSGRSFHNGRFIQRMREKAASLPNVQLEQGTVTSLIEEEGTVKGVQYKTKDGQQFVSYAPLTIVCDGCFSNLRRSLCNPKVDVPSCFVGLVLENCELPFANHGHVILADPSPILFYPISSTEVRCLVDVPGQKVPSISNGEMAKYLKSVVAPQIPPELYDAFVATVDKGNIRTMPNRSMPAAPYPTPGALLMGDAFNMRHPLTGGGMTVAYSDIVVLRNLLRPLRDLNDASTLCKYLESFYTLRKPVASTINTLAGALYRFSAQGPVSLLSGLNPRPISLVLHFFAVAIYGVGRLLLPFPSPKRIWIGARLICGASGIIFPIIKAEGVRQMFFPATVPAYYRTPPTK 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02190 499 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 353 369 - -
Bva06g02190 499 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 338 353 - -
Bva06g02190 499 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 210 225 - -
Bva06g02190 499 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 61 83 - -
Bva06g02190 499 PANTHER SQUALENE MONOOXYGENASE 1 413 IPR040125 GO:0004506|GO:0016126
Bva06g02190 499 Pfam Squalene epoxidase 211 413 IPR013698 GO:0004506|GO:0016021|GO:0050660
Bva06g02190 499 Pfam Squalene epoxidase 415 458 IPR013698 GO:0004506|GO:0016021|GO:0050660
Bva06g02190 499 PANTHER SQUALENE MONOOXYGENASE-RELATED 1 413 - -
Bva06g02190 499 PANTHER SQUALENE MONOOXYGENASE-RELATED 415 498 - -
Bva06g02190 499 SUPERFAMILY FAD/NAD(P)-binding domain 60 415 IPR036188 -
Bva06g02190 499 Gene3D - 52 419 IPR036188 -
Bva06g02190 499 PANTHER SQUALENE MONOOXYGENASE 415 498 IPR040125 GO:0004506|GO:0016126
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02190 Bva-Chr6 14377676 14381518 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g02190 42 498 Miscellaneous Gene Families AT1G58440 76.653 0.0 766
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02190 K00511 - zju:107420604 816.609
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00607 10 5380613 5384640 Bva06g02190 06 14377676 14381518 BWGD
Bva06g02190 06 14377676 14381518 Bva06g02190 06 14377676 14381518 ECH