Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01652 ATGGCTACGTTGAAATCTTCATCGTGTTTCGTATTGTTGCCACTGATACTCGTGCTTGTTTATGTTGATTCAGTATCTTCAACTTCTAGAGGAGCTTTAAATCCTCTAACTCGAGTAGTTCACAGAGCCGGGCTACGCGTCGAGCTCAGGCACGTTGATTCGGGTAAAAACTTGACCAAATTAGAGCGTGTTCGGCATGGGATCAAGCGTGGGAGTCACAGGTTGGAAAGTTTAAATGCCATGGTGTTAGCAGCTGCATCGCCGGATTCGGAAATGGAATCCCCTGTCCATGCAGGGAATGGTGAGTATTTGATGACTTTGTCTATCGGTACTCCTCCGGAGGAATACCCTGCAGTTTTGGACACTGGCAGTGATCTAATATGGACTCAGTGTAAGCCTTGCAGCCAATGTTACAATCAACCCACACCCATTTTTGATCCCCAGAAgtcctcttctttttccaaaCTATCATGCAGTAGCGACCTATGCAGTTCGCTACCCGCTTCTATTTGCAGTGACGGCTGCCAATATGTATACTCCTACGGAGATTATTCAATGACACAAGGCATTTTGGCCACAGAGACCTTCATTTTCGGGGACTCTGGCAACCAAGTTTCGGTTAAAAATATTGGGTTTGGTTGTGGAGAGGATAACGAAGGAGATGGATTCGAGCAAGCTTCGGGTTTAGTAGGACTTGGGCGTGGACCATTGTCTTTGATTTCCCAGCTAAAAGAGTCCAAGTTCTCATATTGCTTGACTTCCATGGAGGACTCCAAAACGAGTACTCTGTTTTTGGGTTCTTTAGGAAGCGTGAACAGTAGCAGCACATACGGAGCACTCACTACCCCTCTGCTAAGAAACCCATCGCAGCCATCTTTTTACTATCTTTCCCTTGAAGGGATTTCTGTGGGCGACACTCGATTGTCTATTGGGAAATCCACTTTTGAGCTTTCAGATGATGGCAGCGGTGGAGTAATCATAGACTCTGGCACAACGATTACCTACATTGAACAGAGTGCTTTTGCTGCACTCAAGAAAGAGTTCACATCTCAAACGAAACTTGCAGTGCACGATTCTGGTTCAACTGGCCTTGATGTTTGCTTTACTTTACCATCAGGGACAACCCAAGTGGAATTCCCCAAATTGGTTTTCCATTTCAAAGGTGCAGATTTGGAGTTGCCTACTAACAACTATATCATTGCTGATTCAAATTTAGGAGTGGCATGCTTAGCCATGGGAGCTTCTAGTGGCATGTCTATATTTGGCAACATTCAACAGCAGAACTTGTTGGTGAACCATGATCTTGAGAAGGAGACCATTTCTTTCATCCCTGTGCAATGTGATCAATTGTG 1352 0.4453 MATLKSSSCFVLLPLILVLVYVDSVSSTSRGALNPLTRVVHRAGLRVELRHVDSGKNLTKLERVRHGIKRGSHRLESLNAMVLAAASPDSEMESPVHAGNGEYLMTLSIGTPPEEYPAVLDTGSDLIWTQCKPCSQCYNQPTPIFDPQKSSSFSKLSCSSDLCSSLPASICSDGCQYVYSYGDYSMTQGILATETFIFGDSGNQVSVKNIGFGCGEDNEGDGFEQASGLVGLGRGPLSLISQLKESKFSYCLTSMEDSKTSTLFLGSLGSVNSSSTYGALTTPLLRNPSQPSFYYLSLEGISVGDTRLSIGKSTFELSDDGSGGVIIDSGTTITYIEQSAFAALKKEFTSQTKLAVHDSGSTGLDVCFTLPSGTTQVEFPKLVFHFKGADLELPTNNYIIADSNLGVACLAMGASSGMSIFGNIQQQNLLVNHDLEKETISFIPVQCDQL 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01652 450 PRINTS Pepsin (A1) aspartic protease family signature 325 336 IPR001461 GO:0004190|GO:0006508
Bva06g01652 450 PRINTS Pepsin (A1) aspartic protease family signature 109 129 IPR001461 GO:0004190|GO:0006508
Bva06g01652 450 SUPERFAMILY Acid proteases 96 448 IPR021109 -
Bva06g01652 450 Pfam Xylanase inhibitor C-terminal 294 442 IPR032799 -
Bva06g01652 450 CDD pepsin_A_like_plant 102 447 IPR034161 -
Bva06g01652 450 Gene3D Acid Proteases 85 266 IPR021109 -
Bva06g01652 450 ProSiteProfiles Peptidase family A1 domain profile. 103 443 IPR033121 -
Bva06g01652 450 Pfam Xylanase inhibitor N-terminal 103 267 IPR032861 -
Bva06g01652 450 PANTHER OS08G0469000 PROTEIN 18 449 - -
Bva06g01652 450 PANTHER OS07G0603500 PROTEIN-RELATED 18 449 - -
Bva06g01652 450 Gene3D Acid Proteases 269 450 IPR021109 -
Bva06g01652 450 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 325 336 IPR001969 GO:0004190|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01652 Bva-Chr6 11637250 11638813 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g01652 101 450 Miscellaneous Gene Families AT1G77480 26.357 6.85e-26 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01652 - - gmx:100811294 639.417
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01652 06 11637250 11638813 Bva06g01652 06 11637250 11638813 ECH
Bva05g00142 05 705444 707303 Bva06g01652 06 11637250 11638813 ECH