Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01586 ATGGAGGCCAAAGCGAAATCGAATGCCACAGGAAAATCCACGGCTGCTCAGACTGGCGATCATGGTCGTGGCGCTGGCTCTTCCAACCCCGTTAAGAAAACGGGATCCGTTTCAATGGATCATGTTCTCCTAGCTATGcgtgagaccaaagaagagagagatctTCGTATGCGCAgcctcttcaatttcttcgaTGCAGCAAATAATGGGTACTTGGACTATGAGCAGATTGAAGCTGACTTGTCTGCTTTGCAAATACCTCCCGAATACAAGTACGCCAAGGAACTCTTGAAGGTTTGTGATGCCAACAGAGATGGAAGGGTTGATTACCATGAATTCCGTCGATACATGGACGATAAGGAGTTAGAGCTTTACCGCATCTTTCAAGCTATTGATGTTGAACACAATGGCTGCATTCTGCCTGAAGAGCTTTGGGATGCACTTGTTAAGGCTGGTTTCacatttgcatatatatatatatatatacacacacatctCCGCTCGCCCACCGACTGTCTCGTGGCTGAAAATCCCCAACTTCATTCCTCTCGTCAAAGTTTCTCTTCTATCCTGGCCAAGATGCGACATGTTTCTCAAAATTGGCTACTTTCATCAGTAATACTGCTGTTGGCATTAAGCACACAACTCTTAAATGCTTTTAGGGCAACtgagagtaaaataaaatcagctgTTTTTCTATCTCCCAAGATTGTATTGGGACCGGGATCAGTAGTTAACAAATTCTACTACGATATTGAGTTTCCAAGAGGTCATATTGCAATCAAGAGTTTCAATGCTGAAGTAATTGATGAAGCAGGGAACCCTATCCCTCTCCAAGAAACTTATCTCCACCATTGGGTTGTTGCTAGATACCATCAACGTAAAAATGTGACACAGAAAGAGTATGATGGTCACCGGGTGCTTAGCCAGTCAGATCATGTTTTTGTAAGAAACAATGGCATATGTCAGAAAGATACTCTTGGACAGTATTTTGGCCTTGGATCTGAAACAAGAGGTACAGCTACAGATATTCCAGGTCCCTTTGGGATAGAAATAGGCAATCCCGCAGAAATTTCAGAAGGGTATGAAGAGAAATGGATGCTTAATGTCCACGCCATTGACACACGAAATGTAGAAGATAAGTTGGGCTGCACTGAGTGCAAGTGTGACCTTTATAATATCACGAAGGATGAATATGGCAGACCTTTGAGGCCAGATTATGTAGGGGGCTTCCTGTGTTGCTATGATAACACTCAGTGTAGAAAGAGAGAAGGCTTTGAGGGTCCAAAGAGAACCCTTTACCTGAGATATACAGTCAAGTGGGTTGACTGGGACGATTCAGTTGTGCCCgttaagatttatattcttgatGTGACTGatacattaaaaataccaGATGATTCAAAAGGAATTAGTCCAAATCATAATTGCCTGGTTGAGTATGAAGTTAAACCTTGCAGCATAGGCCATAAGGATGCTAATAGTTGCATTGATGTCAAAAAGACAAGCCTCCCAATGCCAAGTGGTGGTTATGTCATCTATGGTGTTGCCCACCAGCATTCAGGTGGAATTGGTTCAACCCTATATGGACAGGACGGGAGGGTTATATGTTCCTCAATACCAACCTATGGAAAGGGAGAGGAAGCAGGAAATGAAGCTGGCTACATTGTAGGAATGTCCACTTGTTATCCTCGTCCTGGTTCTGTCAATATACTTGACGGTGAAACTCTAACTTTAGAATCAAGGTATAACAGCAGCCAATTGCACACAGGAGTAATGGGACTCTTCTACCTCTTAGTAGCAGAACGGCTGCCACCCCAACACATTTCACATTCCTCGCGTGCTTCATTTTTcgcaaataatataaattatataatatactg 1883 0.4015 MEAKAKSNATGKSTAAQTGDHGRGAGSSNPVKKTGSVSMDHVLLAMRETKEERDLRMRSLFNFFDAANNGYLDYEQIEADLSALQIPPEYKYAKELLKVCDANRDGRVDYHEFRRYMDDKELELYRIFQAIDVEHNGCILPEELWDALVKAGFTFAYIYIYIHTHLRSPTDCLVAENPQLHSSRQSFSSILAKMRHVSQNWLLSSVILLLALSTQLLNAFRATESKIKSAVFLSPKIVLGPGSVVNKFYYDIEFPRGHIAIKSFNAEVIDEAGNPIPLQETYLHHWVVARYHQRKNVTQKEYDGHRVLSQSDHVFVRNNGICQKDTLGQYFGLGSETRGTATDIPGPFGIEIGNPAEISEGYEEKWMLNVHAIDTRNVEDKLGCTECKCDLYNITKDEYGRPLRPDYVGGFLCCYDNTQCRKREGFEGPKRTLYLRYTVKWVDWDDSVVPVKIYILDVTDTLKIPDDSKGISPNHNCLVEYEVKPCSIGHKDANSCIDVKKTSLPMPSGGYVIYGVAHQHSGGIGSTLYGQDGRVICSSIPTYGKGEEAGNEAGYIVGMSTCYPRPGSVNILDGETLTLESRYNSSQLHTGVMGLFYLLVAERLPPQHISHSSRASFFANNINYIIY 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01586 627 ProSitePatterns EF-hand calcium-binding domain. 101 113 IPR018247 -
Bva06g01586 627 ProSiteProfiles EF-hand calcium-binding domain profile. 52 87 IPR002048 GO:0005509
Bva06g01586 627 ProSiteProfiles EF-hand calcium-binding domain profile. 88 123 IPR002048 GO:0005509
Bva06g01586 627 Gene3D - 29 170 - -
Bva06g01586 627 PANTHER - 194 612 - -
Bva06g01586 627 SUPERFAMILY EF-hand 43 155 IPR011992 -
Bva06g01586 627 Pfam Stress up-regulated Nod 19 226 602 IPR011692 -
Bva06g01586 627 MobiDBLite consensus disorder prediction 7 34 - -
Bva06g01586 627 PANTHER STRESS UP-REGULATED NOD 19 PROTEIN 194 612 IPR011692 -
Bva06g01586 627 MobiDBLite consensus disorder prediction 1 34 - -
Bva06g01586 627 SMART efh_1 56 84 IPR002048 GO:0005509
Bva06g01586 627 SMART efh_1 92 120 IPR002048 GO:0005509
Bva06g01586 627 SMART efh_1 123 151 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01586 Bva-Chr6 11315951 11322636 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g01586 29 153 EF-hand Containing Proteins AT5G51050 81.600 6.59e-64 217
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01586 - - gmx:100803184 665.225
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01586 06 11315951 11322636 Bva05g00178 05 865355 866325 ECH
Bva06g01586 06 11315951 11322636 Bva06g01586 06 11315951 11322636 ECH