Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00178 ATGTCTGGAGCAGGGCAAGGCTTAGACTATAGTCAGATTGAAGCTGGTTTGTCTGCCCTGCAAATACCGCCAGAGTACAAGTACGCCAAGGACCTCTTCAAGGTCTGTGATGCCAACAGAGATGGCAGGGTCGATTACCATGAATTCCGGCGATACATGGACGATAAGGGGTTAGAGCTTTACCGCATCTTTCAAGctattgatattgatgttGAACACAATGGCTGCATTCTCCCAGAAGAGCTTTGGGATGCACTTGTTAAGACTGCTGCCGGGATAGAAATAGATGATGAGGAACTTGCTCGATTTGTGGAGCATGTTGATAAGGATAACAATGGAATTATCACTTTGAAGAATGGAGAGATTTTCTTCTACTATATCCACACGAAGCGactattgaaaatatatatcatcattGGGAGAGGGTGTGTCTA 434 0.4194 MSGAGQGLDYSQIEAGLSALQIPPEYKYAKDLFKVCDANRDGRVDYHEFRRYMDDKGLELYRIFQAIDIDVEHNGCILPEELWDALVKTAAGIEIDDEELARFVEHVDKDNNGIITLKNGEIFFYYIHTKRLLKIYIIIGRGCV 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00178 144 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN 17 143 - -
Bva05g00178 144 SMART efh_1 28 56 IPR002048 GO:0005509
Bva05g00178 144 SMART efh_1 59 89 IPR002048 GO:0005509
Bva05g00178 144 ProSiteProfiles EF-hand calcium-binding domain profile. 24 59 IPR002048 GO:0005509
Bva05g00178 144 SUPERFAMILY EF-hand 8 119 IPR011992 -
Bva05g00178 144 ProSitePatterns EF-hand calcium-binding domain. 37 49 IPR018247 -
Bva05g00178 144 PANTHER SOLUTE CARRIER FAMILY 25 17 143 - -
Bva05g00178 144 Pfam EF hand 30 53 IPR002048 GO:0005509
Bva05g00178 144 Gene3D - 4 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00178 Bva-Chr5 865355 866325 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g00178 8 144 EF-hand Containing Proteins AT5G07320 73.188 1.06e-61 195
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00178 K14684 - nnu:104591896 201.445
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01586 06 11315951 11322636 Bva05g00178 05 865355 866325 ECH
Bva05g00178 05 865355 866325 Bva05g00178 05 865355 866325 ECH